RNA–Protein interactions for RNA: ENST00000481739.1

RXRA-202, Transcript of retinoid X receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RXRA, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-202ENST00000481739 SGMS2Q8NHU3 365 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 FOXC2Q99958 501 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 ELOVL1Q9BW60 279 aa12.41□□□□□ -0.42
RXRA-202ENST00000481739 MRPL27Q9P0M9 148 aaKnown RBP12.41□□□□□ -0.42
RXRA-202ENST00000481739 ZANQ9Y493 2812 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 GNG7O60262 68 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 IGHV4-38-2P0DP08 117 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 MYCNOSP40205 109 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 CNN1P51911 297 aaKnown RBP12.4□□□□□ -0.42
RXRA-202ENST00000481739 LYZP61626 148 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 CENPWQ5EE01 88 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 OR5T1Q8NG75 326 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 FAM110DQ8TAY7 271 aaPredicted RBP12.4□□□□□ -0.42
RXRA-202ENST00000481739 ITPR3Q14573 2671 aa12.4□□□□□ -0.42
RXRA-202ENST00000481739 SVEP1Q4LDE5 3571 aa12.4□□□□□ -0.43
RXRA-202ENST00000481739 SMAD7O15105 426 aaKnown RBP12.39□□□□□ -0.43
RXRA-202ENST00000481739 S100A9P06702 114 aaKnown RBP12.39□□□□□ -0.43
RXRA-202ENST00000481739 NBEAP1P0C6P0 100 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 GP9P14770 177 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 S100A7P31151 101 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 SNRPEP62304 92 aaKnown RBP12.39□□□□□ -0.43
RXRA-202ENST00000481739 CYB5R2Q6BCY4 276 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 ZNF329Q86UD4 541 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 VN1R17PQ8TDU5 208 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 SLC25A39Q9BZJ4 359 aaPredicted RBP12.39□□□□□ -0.43
RXRA-202ENST00000481739 C21orf62Q9NYP8 219 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 CREBBPQ92793 2442 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 J3QLI3 93 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 AVPP01185 164 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 NECAP1Q8NC96 275 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 MEGF9Q9H1U4 602 aa12.39□□□□□ -0.43
RXRA-202ENST00000481739 A0A1W2PPQ1 181 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 PGPEP1LA6NFU8 196 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 PEX7O00628 323 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 TRGC2P03986 189 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 S100A8P05109 93 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 EGR2P11161 476 aaPredicted RBP12.38□□□□□ -0.43
RXRA-202ENST00000481739 FAM120AOSQ5T036 256 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 RNF125Q96EQ8 232 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 SHANK2-AS3Q9BTD1 123 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 GAR1Q9NY12 217 aaKnown RBP12.38□□□□□ -0.43
RXRA-202ENST00000481739 MOB4Q9Y3A3 225 aa12.38□□□□□ -0.43
RXRA-202ENST00000481739 GCGP01275 180 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H1EP10412 219 aaKnown RBP12.37□□□□□ -0.43
RXRA-202ENST00000481739 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
RXRA-202ENST00000481739 C5orf17Q8NAS9 161 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 IGF2BP2-AS1Q96M15 143 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 GSX1Q9H4S2 264 aaPredicted RBP12.37□□□□□ -0.43
RXRA-202ENST00000481739 OSTCQ9NRP0 149 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 CELSR1Q9NYQ6 3014 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 A0A0U1RQK1 487 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 WI2-2373I1.2A0A1W2PRP0 233 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 H3BRN7 92 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 K7EN84 100 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 ISLRO14498 428 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 FABP9Q0Z7S8 132 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 BPIFA4PQ86YQ2 179 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 CIARTQ8N365 385 aaPredicted RBP12.37□□□□□ -0.43
RXRA-202ENST00000481739 ZNF491Q8N8L2 437 aa12.37□□□□□ -0.43
RXRA-202ENST00000481739 AURKAIP1Q9NWT8 199 aaPredicted RBP12.37□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BKO60814 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BJP06899 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BOP23527 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BBP33778 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 AKR1D1P51857 326 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BDP58876 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BCP62807 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST2H2BEQ16778 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 Q56UQ5 140 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 KLF17Q5JT82 389 aaPredicted RBP12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.36□□□□□ -0.43
RXRA-202ENST00000481739 ZNF600Q6ZNG1 722 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 C5orf56Q8N8D9 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BHQ93079 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BNQ99877 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 HIST1H2BMQ99879 126 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 IL36BQ9NZH7 164 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 EPDR1Q9UM22 224 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 TEX15Q9BXT5 2789 aa12.36□□□□□ -0.43
RXRA-202ENST00000481739 PHOX2AO14813 284 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 ERVFC1-1P60608 527 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 TMEM183BQ1AE95 376 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 LYPD1Q8N2G4 141 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 OR4F17Q8NGA8 305 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 ATP6V0BQ99437 205 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 HSPB9Q9BQS6 159 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 ATG101Q9BSB4 218 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 TMUB1Q9BVT8 246 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 OTORQ9NRC9 128 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 KLF12Q9Y4X4 402 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 ABCA1O95477 2261 aa12.35□□□□□ -0.43
RXRA-202ENST00000481739 FLNAP21333 2647 aaKnown RBP12.35□□□□□ -0.43
RXRA-202ENST00000481739 ATP6V0E1O15342 81 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 IL4P05112 153 aa12.34□□□□□ -0.43
RXRA-202ENST00000481739 SLC25A5P05141 298 aaKnown RBP12.34□□□□□ -0.43
RXRA-202ENST00000481739 CRIP2P52943 208 aaPredicted RBP12.34□□□□□ -0.43
RXRA-202ENST00000481739 RANP62826 216 aaKnown RBP12.34□□□□□ -0.43
RXRA-202ENST00000481739 FBXL7Q9UJT9 491 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms