RNA–Protein interactions for RNA: ENST00000481478.1

CACNA1D-206, Transcript of calcium voltage-gated channel subunit alpha1 D, humanhuman

TSL 1 (best)

Gene CACNA1D, Length 5,667 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1D-206ENST00000481478 EP400Q96L91 3159 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 ZFP36L1Q07352 338 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 CRIM1Q9NZV1 1036 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 IGHV1-3A0A0C4DH29 117 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 DMRTA1Q5VZB9 504 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 MCRIP2Q9BUT9 160 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 PKIGQ9Y2B9 76 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 SRRM4A7MD48 611 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 RPL35AP18077 110 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 ID3Q02535 119 aa10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 SRSF4Q08170 494 aaKnown RBP10.68□□□□□ -0.7
CACNA1D-206ENST00000481478 H3BMM0 161 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 RHODO00212 210 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 KLHL30-AS1Q8NEE0 82 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 A0A087WV48 116 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 SAMD5Q5TGI4 173 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 MEGF9Q9H1U4 602 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 A0A0U1RRA0 63 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 H3BUX3 64 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 SSBP2P81877 361 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 LY6DQ14210 128 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 ST6GALNAC3Q8NDV1 305 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 PPIFP30405 207 aaKnown RBP10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 LY6G5BQ8NDX9 201 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 SPRR3Q9UBC9 169 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 TMEM178BH3BS89 294 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 C1QTNF9P0C862 333 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 C5orf64Q2M2E5 130 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 ACTL10Q5JWF8 245 aa10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 RSPO3Q9BXY4 272 aaPredicted RBP10.67□□□□□ -0.7
CACNA1D-206ENST00000481478 NPIPB5A8MRT5 1133 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 CD24P25063 80 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 IGKV1D-13A0A0B4J2D9 117 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 IGKV1-13P0DP09 117 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 TMEM249Q2WGJ8 235 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 LCN12Q6JVE5 192 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 SPANXA1Q9NS26 97 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 TMEM242Q9NWH2 141 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 ZFAND6Q6FIF0 208 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 TMEM126AQ9H061 195 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 FNDC4Q9H6D8 234 aaPredicted RBP10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 LY96Q9Y6Y9 160 aa10.66□□□□□ -0.7
CACNA1D-206ENST00000481478 NOTCH4Q99466 2003 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 RNF222A6NCQ9 220 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 LYNX1G3V0Z9 82 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 LYNX1P0DP58 116 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 NDUFAF3Q9BU61 184 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 A8MXK9 166 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 SUPT4H1P63272 117 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 NEGR1Q7Z3B1 354 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 CHAC1Q9BUX1 264 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 TRIOBPQ9H2D6 2365 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 IGKV2-40A0A087WW87 121 aaPredicted RBP10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 IGKV2D-40P01614 121 aaPredicted RBP10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 C2orf82Q6UX34 121 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 LCNL1Q6ZST4 164 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 OCC1Q8TAD7 63 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 C1orf159Q96HA4 380 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 APC2O95996 2303 aa10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 HELZP42694 1942 aaKnown RBP10.65□□□□□ -0.7
CACNA1D-206ENST00000481478 IGHV3-64A0A075B6Q5 118 aa10.65□□□□□ -0.71
CACNA1D-206ENST00000481478 RPRMLQ8N4K4 120 aa10.65□□□□□ -0.71
CACNA1D-206ENST00000481478 LSM4Q9Y4Z0 139 aaKnown RBP10.65□□□□□ -0.71
CACNA1D-206ENST00000481478 PLXNB3Q9ULL4 1909 aa10.65□□□□□ -0.71
CACNA1D-206ENST00000481478 RAMP3O60896 148 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 FOXL1Q12952 345 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 TMEM155Q4W5P6 130 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 NTN3O00634 580 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 KLF17Q5JT82 389 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 TMEM200BQ69YZ2 307 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 ZNF837Q96EG3 531 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 SNHG12Q9BXW3 62 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 NUP210Q8TEM1 1887 aaPredicted RBP10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 PMS2P5A8MQ11 134 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 TCRAP04437 139 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 TIMM21Q9BVV7 248 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 DAZ1Q9NQZ3 744 aaKnown RBP10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 RALGAPA1Q6GYQ0 2036 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 SFTA2Q6UW10 78 aa10.64□□□□□ -0.71
CACNA1D-206ENST00000481478 FHL1Q13642 323 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 TREML4Q6UXN2 200 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 UNQ6494/PRO21346Q6UXR6 183 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 TRPT1Q86TN4 253 aaKnown RBP10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 PRIMA1Q86XR5 153 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 NKAPP1Q8N9T2 125 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 AHCTF1Q8WYP5 2266 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 MLNRO43193 412 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 KIF26BQ2KJY2 2108 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 GNLYP22749 145 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 RPL15P61313 204 aaKnown RBP10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 LYZL4Q96KX0 146 aa10.63□□□□□ -0.71
CACNA1D-206ENST00000481478 TNFRSF6BO95407 300 aa10.62□□□□□ -0.71
CACNA1D-206ENST00000481478 PSG3Q16557 428 aa10.62□□□□□ -0.71
CACNA1D-206ENST00000481478 IL17RELQ6ZVW7 336 aa10.62□□□□□ -0.71
CACNA1D-206ENST00000481478 TMEM219Q86XT9 240 aa10.62□□□□□ -0.71
CACNA1D-206ENST00000481478 DLX4Q92988 240 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms