RNA–Protein interactions for RNA: ENST00000480900.1

HSPG2-209, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 500 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-209ENST00000480900 C11orf68Q9H3H3 251 aaKnown RBP12.42□□□□□ -0.42
HSPG2-209ENST00000480900 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 SMCO3A2RU48 225 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 JTBO76095 146 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
HSPG2-209ENST00000480900 H2AFB2P0C5Z0 115 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 S100A7P31151 101 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 ASAH1Q13510 395 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 ZNF846Q147U1 533 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 OR8I2Q8N0Y5 310 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 SEC22CQ9BRL7 303 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 TBC1D24Q9ULP9 559 aa12.41□□□□□ -0.42
HSPG2-209ENST00000480900 NUPR2A6NF83 97 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 CCSO14618 274 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 CCNKO75909 580 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 METTL15P1P0C7V9 234 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 C4BPBP20851 252 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 ID1P41134 155 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 PSMB3P49720 205 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 SAMD13Q5VXD3 122 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 OR10P1Q8NGE3 313 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 WDR12Q9GZL7 423 aaKnown RBP12.4□□□□□ -0.42
HSPG2-209ENST00000480900 PTTG2Q9NZH5 202 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 SACSQ9NZJ4 4579 aa12.4□□□□□ -0.42
HSPG2-209ENST00000480900 C7orf66A4D0T2 115 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 ZNF98A6NK75 572 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 H3BMM0 161 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 SOCS3O14543 225 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 GATA2P23769 480 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-209ENST00000480900 GALR1P47211 349 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 TMEM182Q6ZP80 229 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-209ENST00000480900 CYP2G1PQ6ZSU1 146 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 C12orf45Q8N5I9 185 aaPredicted RBP12.39□□□□□ -0.43
HSPG2-209ENST00000480900 TMEM147Q9BVK8 224 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 MGAT4CQ9UBM8 478 aa12.39□□□□□ -0.43
HSPG2-209ENST00000480900 FAM25EA8MYX2 175 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 ISLRO14498 428 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 IL5P05113 134 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 HLA-DRB4P13762 266 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 ORM2P19652 201 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 MEOX2P50222 304 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 NUTF2P61970 127 aaKnown RBP12.38□□□□□ -0.43
HSPG2-209ENST00000480900 RRAS2P62070 204 aaPredicted RBP12.38□□□□□ -0.43
HSPG2-209ENST00000480900 SELENOTP62341 195 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 OR1B1Q8NGR6 318 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 GPR82Q96P67 336 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 SLC25A32Q9H2D1 315 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 NPVFQ9HCQ7 196 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 HLA-DRB4X5D2U9 266 aa12.38□□□□□ -0.43
HSPG2-209ENST00000480900 RYR2Q92736 4967 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 C5orf51A6NDU8 294 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 K7EPK0 472 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 L7N2F9 121 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 UPK1BO75841 260 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 PLP1P60201 277 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 VAMP2P63027 116 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
HSPG2-209ENST00000480900 C2orf50Q96LR7 162 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 GGACTQ9BVM4 153 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 C1QTNF4Q9BXJ3 329 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 SLC25A22Q9H936 323 aa12.37□□□□□ -0.43
HSPG2-209ENST00000480900 ZNF705EA8MWA4 302 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-209ENST00000480900 LINC00869P0C866 280 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 MIFP14174 115 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 TEPPQ6URK8 271 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 FOXI2Q6ZQN5 318 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 Q8NAQ8 132 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 CSNK1G2-AS1Q8NCQ2 148 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 MFFQ9GZY8 342 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 SAV1Q9H4B6 383 aaPredicted RBP12.36□□□□□ -0.43
HSPG2-209ENST00000480900 HIGD1AQ9Y241 93 aa12.36□□□□□ -0.43
HSPG2-209ENST00000480900 LSM5Q9Y4Y9 91 aaKnown RBP12.36□□□□□ -0.43
HSPG2-209ENST00000480900 H3BRN7 92 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 HYPMO75409 117 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 DEDDO75618 318 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 RAP2BP61225 183 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 ARL16Q0P5N6 197 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 SPATA31B1PQ5VZV4 182 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 GSG1LQ6UXU4 331 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 C11orf45Q8TAV5 145 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 ENKURQ8TC29 256 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 CLUHP3Q96NS8 147 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 SHANK2-AS3Q9BTD1 123 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 SLC25A39Q9BZJ4 359 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-209ENST00000480900 CLEC5AQ9NY25 188 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 DOK5Q9P104 306 aa12.35□□□□□ -0.43
HSPG2-209ENST00000480900 KLK5Q9Y337 293 aaPredicted RBP12.35□□□□□ -0.43
HSPG2-209ENST00000480900 DEFB4AO15263 64 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 GDF5OSQ5U4N7 250 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 S100A7AQ86SG5 101 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 ZNF546Q86UE3 836 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
HSPG2-209ENST00000480900 C16orf92Q96LL3 132 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 C17orf77Q96MU5 243 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 RSG1Q9BU20 258 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 SCRT1Q9BWW7 348 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 C11orf1Q9H5F2 150 aa12.34□□□□□ -0.43
HSPG2-209ENST00000480900 X6R8D5 127 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms