RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 STARD9Q9P2P6 4700 aa8.35□□□□□ -1.07
CCM2-213ENST00000480658 IGKV1D-37A0A075B6S9 117 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 H3BMM0 161 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 TSC22D2O75157 780 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 RAP2BP61225 183 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 ID3Q02535 119 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 PXDC1Q5TGL8 231 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 TMEM144Q7Z5S9 345 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 NEU1Q99519 415 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 GGACTQ9BVM4 153 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 SAV1Q9H4B6 383 aaPredicted RBP8.34□□□□□ -1.07
CCM2-213ENST00000480658 MGAT4CQ9UBM8 478 aa8.34□□□□□ -1.07
CCM2-213ENST00000480658 TRAV10A0A0B4J240 114 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 IGHV4-28A0A0C4DH34 117 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 KNCNA6PVL3 124 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 AMBPP02760 352 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 RPL7P18124 248 aaKnown RBP8.33□□□□□ -1.08
CCM2-213ENST00000480658 C4BPBP20851 252 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 PAX9P55771 341 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 ZNF846Q147U1 533 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 ACOT7LQ6ZUV0 252 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 OR10P1Q8NGE3 313 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 MITD1Q8WV92 249 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 SMIM8Q96KF7 97 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 CCDC32Q9BV29 185 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 MAGT1Q9H0U3 335 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 PSENENQ9NZ42 101 aa8.33□□□□□ -1.08
CCM2-213ENST00000480658 PRSS46E5RG02 174 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 SSSCA1O60232 199 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 IL5P05113 134 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 IL7P13232 177 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 NANOS2P60321 138 aaKnown RBP8.32□□□□□ -1.08
CCM2-213ENST00000480658 B2MP61769 119 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 DLK1P80370 383 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 EWSR1Q01844 656 aaKnown RBP eCLIP8.32□□□□□ -1.08
CCM2-213ENST00000480658 BAK1Q16611 211 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 TEPPQ6URK8 271 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 C16orf92Q96LL3 132 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 LINC00052Q96N35 136 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 NPVFQ9HCQ7 196 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 GOLT1BQ9Y3E0 138 aa8.32□□□□□ -1.08
CCM2-213ENST00000480658 SMCO3A2RU48 225 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 ZNF98A6NK75 572 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 H3BP45 60 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 K7EPK0 472 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 DUSP14O95147 198 aaKnown RBP8.31□□□□□ -1.08
CCM2-213ENST00000480658 GIG44P09565 113 aaPredicted RBP8.31□□□□□ -1.08
CCM2-213ENST00000480658 ORM2P19652 201 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 PVALBP20472 110 aaPredicted RBP8.31□□□□□ -1.08
CCM2-213ENST00000480658 PLP1P60201 277 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 OR2F1Q13607 317 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 RAB31Q13636 194 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 IAH1Q2TAA2 248 aaPredicted RBP8.31□□□□□ -1.08
CCM2-213ENST00000480658 ZNF546Q86UE3 836 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 C20orf85Q9H1P6 137 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 HIGD1AQ9Y241 93 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 X6R8D5 127 aa8.31□□□□□ -1.08
CCM2-213ENST00000480658 DNAH1Q9P2D7 4330 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 IGKV1OR2-108A0A075B7D4 117 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 SOCS3O14543 225 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 LYRM1O43325 122 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 HYPMO75409 117 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 ADAP1O75689 374 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 SPART-AS1P0CW21 52 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 CXCL2P19875 107 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 POLR2GP62487 172 aaKnown RBP eCLIP8.3□□□□□ -1.08
CCM2-213ENST00000480658 PSG9Q00887 426 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 ZNF705AQ6ZN79 300 aaPredicted RBP8.3□□□□□ -1.08
CCM2-213ENST00000480658 CYP2G1PQ6ZSU1 146 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 S100ZQ8WXG8 99 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 RNF126Q9BV68 326 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 SLC25A22Q9H936 323 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 DOK5Q9P104 306 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 RFNGQ9Y644 331 aa8.3□□□□□ -1.08
CCM2-213ENST00000480658 L7N2F9 121 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 SCGB1D2O95969 90 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 LINC00869P0C866 280 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 VAMP2P63027 116 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 TMEM14EPQ6UXP3 125 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 ZBTB8BQ8NAP8 495 aaPredicted RBP8.29□□□□□ -1.08
CCM2-213ENST00000480658 OR4B1Q8NGF8 309 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 WDR12Q9GZL7 423 aaKnown RBP8.29□□□□□ -1.08
CCM2-213ENST00000480658 SLC25A32Q9H2D1 315 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 CLEC5AQ9NY25 188 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 XCL2Q9UBD3 114 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 RYR2Q92736 4967 aa8.29□□□□□ -1.08
CCM2-213ENST00000480658 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 A0A0J9YX75 114 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 ZNF705FA8MVS1 300 aaPredicted RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 IGLL5B9A064 214 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 H3BRN7 92 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 GOSR2O14653 212 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 DEFB4AO15263 64 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 HBE1P02100 147 aa8.28□□□□□ -1.08
CCM2-213ENST00000480658 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 RBMY1A1P0DJD3 496 aaKnown RBP8.28□□□□□ -1.08
CCM2-213ENST00000480658 RBMY1CP0DJD4 496 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms