RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 GLMPQ8WWB7 406 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 ASB13Q8WXK3 278 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 NARS2Q96I59 477 aaKnown RBP3.65□□□□□ -1.83
PTCD3-213ENST00000480102 GPR82Q96P67 336 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 TRGV9Q99603 122 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 NEURL2Q9BR09 285 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 MARVELD1Q9BSK0 173 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 HINT2Q9BX68 163 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 C20orf85Q9H1P6 137 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 MGAT4CQ9UBM8 478 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 MLXQ9UH92 298 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 U3KQK5 164 aa3.65□□□□□ -1.83
PTCD3-213ENST00000480102 FAM240BA0A1B0GVZ2 78 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 ZNF320A2RRD8 509 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 OR11H12B2RN74 326 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 C3orf84H3BNL1 204 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 BUB3O43684 328 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 IFNA10P01566 189 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 HNRNPCP07910 306 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTCD3-213ENST00000480102 FRMD6-AS1P0C7T7 363 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 RD3LP0DJH9 198 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 OR10J1P30954 320 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 DEFA1P59665 94 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 DEFA3P59666 94 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 SELENOTP62341 195 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 CYCSP99999 105 aaKnown RBP3.64□□□□□ -1.83
PTCD3-213ENST00000480102 GAMTQ14353 236 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 DEFB121Q5J5C9 76 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 SPATA31B1PQ5VZV4 182 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 SUMO4Q6EEV6 95 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 BTNL8Q6UX41 500 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM14EPQ6UXP3 125 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 C19orf35Q6ZS72 473 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 TMEM144Q7Z5S9 345 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 OR51G1Q8NGK1 321 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 OR52B4Q8NGK2 314 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 OR1S1Q8NH92 325 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 DCANP1Q8TF63 244 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 NPIPB3Q92617 1050 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 PINX1Q96BK5 328 aaKnown RBP3.64□□□□□ -1.83
PTCD3-213ENST00000480102 METTL26Q96S19 204 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 RHPN1-AS1Q9BWJ2 59 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 RBKSQ9H477 322 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 FBXL17Q9UF56 701 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 TBC1D24Q9ULP9 559 aa3.64□□□□□ -1.83
PTCD3-213ENST00000480102 STRAPQ9Y3F4 350 aaKnown RBP3.64□□□□□ -1.83
PTCD3-213ENST00000480102 PUS1Q9Y606 427 aaKnown RBP eCLIP3.64□□□□□ -1.83
PTCD3-213ENST00000480102 IZUMO1RA6ND01 250 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 PMS2P5A8MQ11 134 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 H0YIZ8 118 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 DEDDO75618 318 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 IFNA4P05014 189 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 NPSP0C0P6 89 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 RND2P52198 227 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 APOC4P55056 127 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 CD81P60033 236 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 DLK1P80370 383 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 ATP6V1FQ16864 119 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 IZUMO4Q1ZYL8 232 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 VWC2Q2TAL6 325 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 ODF3L2Q3SX64 289 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 SBSPONQ8IVN8 264 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 ZBTB8BQ8NAP8 495 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-213ENST00000480102 UBAC2Q8NBM4 344 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 GATAD1Q8WUU5 269 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 SLC35E1Q96K37 410 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 GGTLC1Q9BX51 225 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 C11orf1Q9H5F2 150 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 GPN1Q9HCN4 374 aaPredicted RBP3.63□□□□□ -1.83
PTCD3-213ENST00000480102 NPVFQ9HCQ7 196 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 NUDT15Q9NV35 164 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 CLEC5AQ9NY25 188 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 SACSQ9NZJ4 4579 aa3.63□□□□□ -1.83
PTCD3-213ENST00000480102 KMT2CQ8NEZ4 4911 aaKnown RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 IGKV1D-37A0A075B6S9 117 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 IGKV1OR2-108A0A075B7D4 117 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 LOC102724200A0A096LPH7 203 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 C7orf66A4D0T2 115 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 K7EQG2 157 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 MPDU1O75352 247 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 ADAP1O75689 374 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 YIF1AO95070 293 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PTTG1O95997 202 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 IGHV3-23P01764 117 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PRB2P02812 416 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 HOXB5P09067 269 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 CD7P09564 240 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PSG1P11464 419 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 CXCL2P19875 107 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 ANXA7P20073 488 aaKnown RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PVALBP20472 110 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 S100A11P31949 105 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PCP4P48539 62 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 PAX9P55771 341 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 DEFA5Q01523 94 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 BAXQ07812 192 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 HAGHQ16775 308 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 IAH1Q2TAA2 248 aaPredicted RBP3.62□□□□□ -1.83
PTCD3-213ENST00000480102 ACOT7LQ6ZUV0 252 aa3.62□□□□□ -1.83
PTCD3-213ENST00000480102 C12orf45Q8N5I9 185 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms