RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 ASCL2Q99929 193 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 AGMATQ9BSE5 352 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 NIT2Q9NQR4 276 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 LINC00473A8K010 186 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 LHBP01229 141 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 CCL20P78556 96 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 FAM162BQ5T6X4 162 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 IFI27L2Q9H2X8 130 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 PARLQ9H300 379 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 ACANP16112 2415 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 TSTD3H0UI37 97 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 RELBQ01201 579 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 LINC00518Q8N0U6 118 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 ARL2-SNX15V9GYD0 113 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 TNFRSF13BO14836 293 aaPredicted RBP4.79□□□□□ -1.64
CPS1-207ENST00000479988 ATP6V0E1O15342 81 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 IGHV3-48P01763 117 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 C8orf88P0DMB2 117 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 GNG4P50150 75 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 C2orf83Q53S99 150 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 MIC13Q5XKP0 118 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 DGAT2L7PQ6IED9 249 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 PRR27Q6MZM9 219 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 RPP25LQ8N5L8 163 aaKnown RBP4.79□□□□□ -1.64
CPS1-207ENST00000479988 IL17DQ8TAD2 202 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 SRD5A3Q9H8P0 318 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 SIGLEC9Q9Y336 463 aa4.79□□□□□ -1.64
CPS1-207ENST00000479988 TRAV9-1A0A075B6T8 112 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 H0YJW9 148 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 OVOL3O00110 214 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 PSG9Q00887 426 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 ST6GALNAC6Q969X2 333 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 ZNF331Q9NQX6 463 aaPredicted RBP4.78□□□□□ -1.64
CPS1-207ENST00000479988 SETD2Q9BYW2 2564 aaPredicted RBP4.78□□□□□ -1.64
CPS1-207ENST00000479988 IGHV3OR16-8A0A075B7F1 116 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 IGHV3-66A0A0C4DH42 116 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 C15orf62A8K5M9 175 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 IL6RP08887 468 aaPredicted RBP4.78□□□□□ -1.64
CPS1-207ENST00000479988 MYCNOSP40205 109 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 HILS1P60008 231 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 TFF3Q07654 80 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 Q6ZPA2 131 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 TCF24Q7RTU0 167 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 LINC00311Q8N616 119 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 C8orf31Q8N9H6 132 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 TMEM116Q8NCL8 245 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 GPR82Q96P67 336 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 TBX15Q96SF7 602 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 DNAJC4Q9NNZ3 241 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 ZNRD1Q9P1U0 126 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 TRBV24-1A0A075B6N3 115 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 GPX1P07203 203 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 GCHFRP30047 84 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 C11orf71Q6IPW1 123 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 SYT8Q8NBV8 401 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 OR11H6Q8NGC7 330 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 LINC01587Q99440 93 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 SMR3AQ99954 134 aa4.78□□□□□ -1.64
CPS1-207ENST00000479988 RPL35AP18077 110 aaKnown RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 ERVFC1-1P60608 527 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 PVRIGQ6DKI7 326 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 DUX4L9Q6RFH8 374 aaPredicted RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 NOL4LQ96MY1 436 aaPredicted RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 FUT9Q9Y231 359 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 C9JQL5 133 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 VWC2Q2TAL6 325 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 TREML4Q6UXN2 200 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 PAXXQ9BUH6 204 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 DAZ1Q9NQZ3 744 aaKnown RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 TRGV2A0A075B6R0 118 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 NDUFB4O95168 129 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 ORM1P02763 201 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 ARL14EPLP0DKL9 152 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 CDX1P47902 265 aaPredicted RBP4.77□□□□□ -1.65
CPS1-207ENST00000479988 SMAGPQ0VAQ4 97 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 FOXE3Q13461 319 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 LEMD1Q68G75 181 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 C19orf35Q6ZS72 473 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 OR1P1Q8NH06 330 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 DUX3Q96PT4 197 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 IMMP2LQ96T52 175 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 TRAPPC1Q9Y5R8 145 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 MT-ND6P03923 174 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 DLX1P56177 255 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 C17orf58Q2M2W7 97 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 ZNF383Q8NA42 475 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 CYYR1Q96J86 154 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 GGTLC1Q9BX51 225 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 TMEM14BQ9NUH8 114 aa4.77□□□□□ -1.65
CPS1-207ENST00000479988 BCL6BQ8N143 479 aaPredicted RBP4.76□□□□□ -1.65
CPS1-207ENST00000479988 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.76□□□□□ -1.65
CPS1-207ENST00000479988 SMAD5-AS1Q9Y6J3 95 aa4.76□□□□□ -1.65
CPS1-207ENST00000479988 H3BUA1 57 aa4.76□□□□□ -1.65
CPS1-207ENST00000479988 HLA-DRB1P01911 266 aa4.76□□□□□ -1.65
CPS1-207ENST00000479988 INSL3P51460 131 aa4.76□□□□□ -1.65
CPS1-207ENST00000479988 DPH3Q96FX2 82 aa4.76□□□□□ -1.65
CPS1-207ENST00000479988 LY96Q9Y6Y9 160 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms