RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 PRSS46E5RG02 174 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 SOCS3O14543 225 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 SYNGR2O43760 224 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 TMEM41BQ5BJD5 291 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 OR8G2PQ6IF36 304 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 OR8I2Q8N0Y5 310 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 LRTM2Q8N967 370 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 TRGV9Q99603 122 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 SRRQ9GZT4 340 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 SLC25A32Q9H2D1 315 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 CACFD1Q9UGQ2 172 aa12.5□□□□□ -0.41
ECHDC1-216ENST00000479525 TRAV10A0A0B4J240 114 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 ORM2P19652 201 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 NKX2-1P43699 371 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 POLR2GP62487 172 aaKnown RBP eCLIP12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 AKR1C1Q04828 323 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 THAP8Q8NA92 274 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 C17orf77Q96MU5 243 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 HRH4Q9H3N8 390 aa12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 SAV1Q9H4B6 383 aaPredicted RBP12.49□□□□□ -0.41
ECHDC1-216ENST00000479525 C11orf94C9JXX5 98 aa12.48□□□□□ -0.41
ECHDC1-216ENST00000479525 UBE2MP61081 183 aaKnown RBP12.48□□□□□ -0.41
ECHDC1-216ENST00000479525 ACOT7LQ6ZUV0 252 aa12.48□□□□□ -0.41
ECHDC1-216ENST00000479525 TMED3Q9Y3Q3 217 aa12.48□□□□□ -0.41
ECHDC1-216ENST00000479525 DEFB131BA0A096LNP1 70 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 C9orf170A2RU37 121 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 MED6O75586 246 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 ZNF705DP0CH99 300 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 ZNF705BP0CI00 300 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 ANXA7P20073 488 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 NUTF2P61970 127 aaKnown RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 RRAS2P62070 204 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 FAM78BQ5VT40 261 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 ZNF709Q8N972 641 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 OR1B1Q8NGR6 318 aa12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 SDHCQ99643 169 aaPredicted RBP12.47□□□□□ -0.41
ECHDC1-216ENST00000479525 SSSCA1O60232 199 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 SCGB1D2O95969 90 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 PRM2P04554 102 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 SLC25A6P12236 298 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 ID1P41134 155 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 INPP1P49441 399 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 PSMB3P49720 205 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 FGL1Q08830 312 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 FOXI2Q6ZQN5 318 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 C16orf92Q96LL3 132 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 RSG1Q9BU20 258 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 C1QTNF4Q9BXJ3 329 aa12.46□□□□□ -0.41
ECHDC1-216ENST00000479525 ZNF98A6NK75 572 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 FABP1P07148 127 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 NUP62P37198 522 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 SPANXN2Q5MJ10 180 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 TRIQKQ629K1 86 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 RNF182Q8N6D2 247 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 CIB3Q96Q77 187 aaPredicted RBP12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 SEPSECSQ9HD40 501 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 STRAPQ9Y3F4 350 aaKnown RBP12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 HECTD4Q9Y4D8 3996 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 DNAH2Q9P225 4427 aa12.45□□□□□ -0.42
ECHDC1-216ENST00000479525 BTCP35070 178 aa12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 ATP5IP56385 69 aaPredicted RBP12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 ZNF705AQ6ZN79 300 aaPredicted RBP12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 C1orf158Q8N1D5 194 aa12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 PSENENQ9NZ42 101 aa12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 PFDN2Q9UHV9 154 aa12.44□□□□□ -0.42
ECHDC1-216ENST00000479525 A0A0J9YX75 114 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 ZNF705FA8MVS1 300 aaPredicted RBP12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 NDUFB6O95139 128 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 SNRPCP09234 159 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 HTN3P15516 51 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 C1orf194Q5T5A4 169 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 BPIFCQ8NFQ6 507 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 OR4D5Q8NGN0 318 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 M0R2N4 97 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 OR4E1P0C645 316 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 GALR1P47211 349 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 RPP30P78346 268 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 PSG9Q00887 426 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 EBLN2Q6P2I7 272 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 CYP2G1PQ6ZSU1 146 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 UHRF2Q96PU4 802 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 C7orf50Q9BRJ6 194 aaKnown RBP12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
ECHDC1-216ENST00000479525 PMS2P5A8MQ11 134 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 M0R2Z0 102 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 ISLRO14498 428 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 CCSO14618 274 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 PAX9P55771 341 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 ID3Q02535 119 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 C4orf46Q504U0 113 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 FAM222AQ5U5X8 452 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 RPRMQ9NS64 109 aa12.42□□□□□ -0.42
ECHDC1-216ENST00000479525 TRAV8-2A0A0B4J237 113 aa12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 IL5P05113 134 aa12.41□□□□□ -0.42
ECHDC1-216ENST00000479525 TCTAP57738 103 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms