RNA–Protein interactions for RNA: ENST00000478958.5

LRRFIP1-211, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best)

Gene LRRFIP1, Length 2,869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-211ENST00000478958 SPACA3Q8IXA5 215 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 NDFIP1Q9BT67 221 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 MGST3O14880 152 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 KIR2DL2P43627 348 aaPredicted RBP8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 RPL8P62917 257 aaKnown RBP8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 HES3Q5TGS1 186 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 PEAR1Q5VY43 1037 aaPredicted RBP8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 MORN5Q5VZ52 161 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 SNRNP40Q96DI7 357 aaKnown RBP8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 MCRIP2Q9BUT9 160 aaKnown RBP8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 PCNX1Q96RV3 2341 aa8.97□□□□□ -0.97
LRRFIP1-211ENST00000478958 C9JCJ5 164 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 ETDBQ3ZM63 59 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 ZNF562Q6V9R5 426 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 TMEM178AQ8NBL3 297 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 ZNF503Q96F45 646 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 VGLL1Q99990 258 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 IDI2-AS1Q9NZ38 188 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 RABAC1Q9UI14 185 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 DMXL1Q9Y485 3027 aa8.96□□□□□ -0.97
LRRFIP1-211ENST00000478958 SPTBN2O15020 2390 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 ATMQ13315 3056 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 IGHV1-18A0A0C4DH31 117 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PLAUP00749 431 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 SP9P0CG40 484 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 ATP5J2P56134 94 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR20EP86478 221 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR20CP86479 221 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR20DP86480 221 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR20BP86481 221 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR20AP86496 221 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 PPP1R35Q8TAP8 253 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 ABHD17AQ96GS6 310 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 GRAMD2BQ96HH9 432 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 MAP1LC3CQ9BXW4 147 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 ZNF355PQ9NSJ1 428 aa8.96□□□□□ -0.98
LRRFIP1-211ENST00000478958 SRRM5B3KS81 715 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 F8W1H4 67 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 TNFRSF13BO14836 293 aaPredicted RBP8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 NKX2-8O15522 239 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 AREGP15514 252 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 FCGR2BP31994 310 aaPredicted RBP8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 KLF5Q13887 457 aaPredicted RBP8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 TTC9CQ8N5M4 171 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 C11orf52Q96A22 123 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 PTPRBP23467 1997 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 SRRM4A7MD48 611 aaKnown RBP8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 CFHR2P36980 270 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 CAMPP49913 170 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 TRAT1Q6PIZ9 186 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 TMEM167BQ9NRX6 74 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 TMEM14BQ9NUH8 114 aa8.95□□□□□ -0.98
LRRFIP1-211ENST00000478958 PYYP10082 97 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 FAM120AOSQ5T036 256 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 ITLN1Q8WWA0 313 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 DDB2Q92466 427 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 ARPC1AQ92747 370 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 RAX2Q96IS3 184 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 LY96Q9Y6Y9 160 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 TRGV8A0A0C4DH27 118 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 FAM90A9PA6NNJ1 464 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 M0R1B8 84 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 KALRNO60229 2985 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 MT-ATP8P03928 68 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 SMIM13P0DJ93 91 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 MFAP2P55001 183 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 UBE2L3P68036 154 aaKnown RBP8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 C17orf58Q2M2W7 97 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 FAM162BQ5T6X4 162 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 C1QTNF4Q9BXJ3 329 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 ZNF318Q5VUA4 2279 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 DSCAMO60469 2012 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 C20orf78Q9BR46 151 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 FOXA2Q9Y261 457 aaPredicted RBP8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 TTC28Q96AY4 2481 aa8.94□□□□□ -0.98
LRRFIP1-211ENST00000478958 IZUMO1RA6ND01 250 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 FAM216BQ8N7L0 139 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 CCL13Q99616 98 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 RAB1BQ9H0U4 201 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 IGHV1-24A0A0C4DH33 117 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 A1L4Q6 167 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRR33A8MZF0 331 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 IGLV2-8P01709 118 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 PRB4P10163 310 aaPredicted RBP8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 CD24P25063 80 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 INSL3P51460 131 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 FDCSPQ8NFU4 85 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 OSTCQ9NRP0 149 aa8.93□□□□□ -0.98
LRRFIP1-211ENST00000478958 TACC2O95359 2948 aa8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 SYT8Q8NBV8 401 aa8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 H1FXQ92522 213 aaKnown RBP8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 KIR2DS2P43631 304 aa8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 TAS2R45P59539 299 aa8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 TIMM8BQ9Y5J9 83 aaPredicted RBP8.92□□□□□ -0.98
LRRFIP1-211ENST00000478958 TEX50A0A1B0GTY4 177 aa8.91□□□□□ -0.98
LRRFIP1-211ENST00000478958 H3BTX0 84 aa8.91□□□□□ -0.98
LRRFIP1-211ENST00000478958 C8orf88P0DMB2 117 aa8.91□□□□□ -0.98
LRRFIP1-211ENST00000478958 APELAP0DMC3 54 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms