RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 PRRG2O14669 202 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 ARMS2P0C7Q2 107 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 PLGLB1Q02325 96 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 FOXI1Q12951 378 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 KLRD1Q13241 179 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 ZNF826PQ6ZT77 177 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 DOCK10Q96BY6 2186 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 COX7A2P2O60397 106 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 CNIH1O95406 144 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 CRYGCP07315 174 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 CYB561P49447 251 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 TMEM178AQ8NBL3 297 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 OCIAD1Q9NX40 245 aa17.09■□□□□ 0.33
SDF4-206ENST00000478938 FOXA2Q9Y261 457 aaPredicted RBP17.09■□□□□ 0.33
SDF4-206ENST00000478938 CFHR2P36980 270 aa17.08■□□□□ 0.33
SDF4-206ENST00000478938 C1orf229Q6ZS94 237 aaPredicted RBP17.08■□□□□ 0.33
SDF4-206ENST00000478938 CEND1Q8N111 149 aa17.08■□□□□ 0.33
SDF4-206ENST00000478938 GNG12Q9UBI6 72 aa17.08■□□□□ 0.33
SDF4-206ENST00000478938 UFC1Q9Y3C8 167 aa17.08■□□□□ 0.33
SDF4-206ENST00000478938 PGPA6NDG6 321 aa17.08■□□□□ 0.32
SDF4-206ENST00000478938 BRI3O95415 125 aa17.08■□□□□ 0.32
SDF4-206ENST00000478938 OVOL3O00110 214 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 MYCNOSP40205 109 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 ALKBH6Q3KRA9 238 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 OR5AN1Q8NGI8 311 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 RALYQ9UKM9 306 aaKnown RBP17.07■□□□□ 0.32
SDF4-206ENST00000478938 CACNG8Q8WXS5 425 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 FAM110AQ9BQ89 295 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 ZNF492Q9P255 531 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 HIGD1BQ9P298 99 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 KLF12Q9Y4X4 402 aa17.07■□□□□ 0.32
SDF4-206ENST00000478938 RFPL3SP0C7P2 107 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 COL8A1P27658 744 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 EDDM3AQ14507 147 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 C10orf113Q5VZT2 155 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 PATE2Q6UY27 113 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 IFI27L1Q96BM0 104 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 H3BTX0 84 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 SCRG1O75711 98 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 C1orf122Q6ZSJ8 110 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 NFE4Q86UQ8 179 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 PDPNQ86YL7 162 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 C1QTNF4Q9BXJ3 329 aa17.06■□□□□ 0.32
SDF4-206ENST00000478938 TRBV25-1A0A075B6N4 114 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 SMIM20Q8N5G0 67 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 FAM169BQ8N8A8 192 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 LMO7DNF2Z398 122 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 C15orf65H3BRN8 121 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 SPINT2O43291 252 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 ZNF134P52741 427 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 PLP2Q04941 152 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 ZNF766Q5HY98 468 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 UTF1Q5T230 341 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 CIARTQ8N365 385 aaPredicted RBP17.05■□□□□ 0.32
SDF4-206ENST00000478938 PRELID3AQ96N28 172 aa17.05■□□□□ 0.32
SDF4-206ENST00000478938 A0A1B0GUT8 65 aa17.04■□□□□ 0.32
SDF4-206ENST00000478938 hADV38S2A0JD32 116 aa17.04■□□□□ 0.32
SDF4-206ENST00000478938 C12orf74Q32Q52 190 aa17.04■□□□□ 0.32
SDF4-206ENST00000478938 FZR1Q9UM11 496 aa17.04■□□□□ 0.32
SDF4-206ENST00000478938 PCSK5Q92824 1860 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 TRAV8-1A0A0A6YYK1 113 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 IGHV3-48P01763 117 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 LCNL1Q6ZST4 164 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 FAM90A27PA6NNH2 459 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 D6R8Y8 96 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 LINC01565O15544 149 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 SSR4P51571 173 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 PCOLCEQ15113 449 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 LEAP2Q969E1 77 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 TPPP3Q9BW30 176 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 FAM186AA6NE01 2351 aa17.03■□□□□ 0.32
SDF4-206ENST00000478938 PRSS29PA6NIE9 313 aa17.02■□□□□ 0.32
SDF4-206ENST00000478938 NPIPB5A8MRT5 1133 aa17.02■□□□□ 0.32
SDF4-206ENST00000478938 HBDP02042 147 aa17.02■□□□□ 0.32
SDF4-206ENST00000478938 SRSF6Q13247 344 aaKnown RBP17.02■□□□□ 0.32
SDF4-206ENST00000478938 ZNF714Q96N38 554 aa17.02■□□□□ 0.32
SDF4-206ENST00000478938 IFI27L2Q9H2X8 130 aa17.02■□□□□ 0.32
SDF4-206ENST00000478938 NDUFS7O75251 213 aa17.02■□□□□ 0.31
SDF4-206ENST00000478938 AGRNO00468 2067 aa17.02■□□□□ 0.31
SDF4-206ENST00000478938 FSTL3O95633 263 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 CT45A10P0DMU9 189 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 SMCPP49901 116 aaPredicted RBP17.01■□□□□ 0.31
SDF4-206ENST00000478938 MRPS21P82921 87 aaKnown RBP17.01■□□□□ 0.31
SDF4-206ENST00000478938 SRYQ05066 204 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 ANXA2RQ3ZCQ2 193 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 TUSC5Q8IXB3 177 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 CELSR3Q9NYQ7 3312 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 CD69Q07108 199 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 FMC1Q96HJ9 113 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 PRNDQ9UKY0 176 aa17.01■□□□□ 0.31
SDF4-206ENST00000478938 WI2-2373I1.2A0A1W2PRP0 233 aa17■□□□□ 0.31
SDF4-206ENST00000478938 RPL32P62910 135 aaKnown RBP17■□□□□ 0.31
SDF4-206ENST00000478938 RRN3P1Q2M238 152 aa17■□□□□ 0.31
SDF4-206ENST00000478938 FLYWCH2Q96CP2 140 aaKnown RBP17■□□□□ 0.31
SDF4-206ENST00000478938 SRSF12Q8WXF0 261 aaKnown RBP17■□□□□ 0.31
SDF4-206ENST00000478938 ASCL2Q99929 193 aa17■□□□□ 0.31
SDF4-206ENST00000478938 PRCDQ00LT1 54 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 RIGQ13278 110 aa16.99■□□□□ 0.31
SDF4-206ENST00000478938 SLC25A48Q6ZT89 311 aaKnown RBP16.99■□□□□ 0.31
SDF4-206ENST00000478938 LINC00305Q7Z4B0 112 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms