RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 C1orf194Q5T5A4 169 aa16.43■□□□□ 0.22
C9orf3-216ENST00000478603 CIB3Q96Q77 187 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-216ENST00000478603 SAV1Q9H4B6 383 aaPredicted RBP16.43■□□□□ 0.22
C9orf3-216ENST00000478603 PRSS46E5RG02 174 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 ID1P41134 155 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 PSMB3P49720 205 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 C12orf74Q32Q52 190 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 OR8I2Q8N0Y5 310 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 COQ8AQ8NI60 647 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 DEDD2Q8WXF8 326 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 RBM38Q9H0Z9 239 aaKnown RBP16.42■□□□□ 0.22
C9orf3-216ENST00000478603 DNAH6Q9C0G6 4158 aa16.42■□□□□ 0.22
C9orf3-216ENST00000478603 IGHV4-4A0A075B6R2 117 aa16.41■□□□□ 0.22
C9orf3-216ENST00000478603 H3BP45 60 aa16.41■□□□□ 0.22
C9orf3-216ENST00000478603 SPANXN5Q5MJ07 72 aa16.41■□□□□ 0.22
C9orf3-216ENST00000478603 FOXI2Q6ZQN5 318 aa16.41■□□□□ 0.22
C9orf3-216ENST00000478603 SRRQ9GZT4 340 aa16.41■□□□□ 0.22
C9orf3-216ENST00000478603 F6UB75 175 aa16.4■□□□□ 0.22
C9orf3-216ENST00000478603 GATA2P23769 480 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-216ENST00000478603 RPP30P78346 268 aaKnown RBP16.4■□□□□ 0.22
C9orf3-216ENST00000478603 ZNF705AQ6ZN79 300 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-216ENST00000478603 TMEM182Q6ZP80 229 aaPredicted RBP16.4■□□□□ 0.22
C9orf3-216ENST00000478603 OR4B1Q8NGF8 309 aa16.4■□□□□ 0.22
C9orf3-216ENST00000478603 IGHV3OR16-12A0A075B7B8 117 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 ADAP1O75689 374 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 SPANXN2Q5MJ10 180 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 SCRT1Q9BWW7 348 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 SLC35B3Q9H1N7 401 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 SLC25A32Q9H2D1 315 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 SLC25A22Q9H936 323 aa16.39■□□□□ 0.21
C9orf3-216ENST00000478603 DEFB131BA0A096LNP1 70 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 C9orf170A2RU37 121 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 AKR1C1Q04828 323 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 BAK1Q16611 211 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 ZNF709Q8N972 641 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 C20orf173Q96LM9 149 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 FLVCR2Q9UPI3 526 aa16.38■□□□□ 0.21
C9orf3-216ENST00000478603 ZNF705FA8MVS1 300 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-216ENST00000478603 ISLRO14498 428 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 ZNF705DP0CH99 300 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-216ENST00000478603 ZNF705BP0CI00 300 aaPredicted RBP16.37■□□□□ 0.21
C9orf3-216ENST00000478603 ORM2P19652 201 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 EMP1P54849 157 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 UBE2MP61081 183 aaKnown RBP16.37■□□□□ 0.21
C9orf3-216ENST00000478603 ACOT7LQ6ZUV0 252 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 C17orf77Q96MU5 243 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 NEU1Q99519 415 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 RNF126Q9BV68 326 aa16.37■□□□□ 0.21
C9orf3-216ENST00000478603 STRAPQ9Y3F4 350 aaKnown RBP16.37■□□□□ 0.21
C9orf3-216ENST00000478603 LINC00854A0A1B0GVQ3 168 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 ZNF98A6NK75 572 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 CFDP00746 253 aaPredicted RBP16.36■□□□□ 0.21
C9orf3-216ENST00000478603 GALR1P47211 349 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 INPP1P49441 399 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 POLR2GP62487 172 aaKnown RBP eCLIP16.36■□□□□ 0.21
C9orf3-216ENST00000478603 FAM78BQ5VT40 261 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 BPIFCQ8NFQ6 507 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 C16orf92Q96LL3 132 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 RSG1Q9BU20 258 aa16.36■□□□□ 0.21
C9orf3-216ENST00000478603 NDUFB6O95139 128 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 PAX9P55771 341 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 ID3Q02535 119 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 TRIQKQ629K1 86 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 EBLN2Q6P2I7 272 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 OR1B1Q8NGR6 318 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 CLUHP3Q96NS8 147 aa16.35■□□□□ 0.21
C9orf3-216ENST00000478603 A0A0J9YX75 114 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 SMCO3A2RU48 225 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 PSG9Q00887 426 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 RPRMQ9NS64 109 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 PSENENQ9NZ42 101 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 SLC45A2Q9UMX9 530 aa16.34■□□□□ 0.21
C9orf3-216ENST00000478603 NAP1L6A6NFF2 107 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 SMIM9A6NGZ8 99 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 AMBPP02760 352 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 MEOX2P50222 304 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 SPATA31B1PQ5VZV4 182 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 OR4D5Q8NGN0 318 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 SDHCQ99643 169 aaPredicted RBP16.33■□□□□ 0.2
C9orf3-216ENST00000478603 TMEM147Q9BVK8 224 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 DOK5Q9P104 306 aa16.33■□□□□ 0.2
C9orf3-216ENST00000478603 ZNF701M0R085 212 aaPredicted RBP16.32■□□□□ 0.2
C9orf3-216ENST00000478603 SSSCA1O60232 199 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 CCNKO75909 580 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 OR4E1P0C645 316 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 SPART-AS1P0CW21 52 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 ANXA7P20073 488 aaKnown RBP16.32■□□□□ 0.2
C9orf3-216ENST00000478603 SAMD13Q5VXD3 122 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 IGFL4Q6B9Z1 124 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 TMEM144Q7Z5S9 345 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 C1orf158Q8N1D5 194 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 RFNGQ9Y644 331 aa16.32■□□□□ 0.2
C9orf3-216ENST00000478603 PMS2P5A8MQ11 134 aa16.31■□□□□ 0.2
C9orf3-216ENST00000478603 CYP2G1PQ6ZSU1 146 aa16.31■□□□□ 0.2
C9orf3-216ENST00000478603 PLA2G2EQ9NZK7 142 aa16.31■□□□□ 0.2
C9orf3-216ENST00000478603 GOLT1BQ9Y3E0 138 aa16.31■□□□□ 0.2
C9orf3-216ENST00000478603 TMEM189A5PLL7 270 aa16.3■□□□□ 0.2
C9orf3-216ENST00000478603 IFNA21P01568 189 aa16.3■□□□□ 0.2
C9orf3-216ENST00000478603 IL5P05113 134 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms