RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 RAB32Q13637 225 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 CYP2G1PQ6ZSU1 146 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 MUC7Q8TAX7 377 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 NPVFQ9HCQ7 196 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 MGAT4CQ9UBM8 478 aa11.49□□□□□ -0.57
HMGA1-206ENST00000478214 FAM24AA6NFZ4 105 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 FNDC10F2Z333 226 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 UBE2CO00762 179 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 ORM2P19652 201 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 PVALBP20472 110 aaPredicted RBP11.48□□□□□ -0.57
HMGA1-206ENST00000478214 DEFB135Q30KP9 77 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 C1orf194Q5T5A4 169 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 Q6ZWC4 215 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 NRN1Q9NPD7 142 aa11.48□□□□□ -0.57
HMGA1-206ENST00000478214 DEDDO75618 318 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 CST7O76096 145 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 PSMG4Q5JS54 123 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 OR8I2Q8N0Y5 310 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 OR1B1Q8NGR6 318 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 GGACTQ9BVM4 153 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 CSTL1Q9H114 145 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 DOK5Q9P104 306 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 FBXL17Q9UF56 701 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 SLC45A2Q9UMX9 530 aa11.47□□□□□ -0.57
HMGA1-206ENST00000478214 KNCNA6PVL3 124 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 C3orf84H3BNL1 204 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 SPRY2O43597 315 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 SELENOTP62341 195 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 SLC38A11Q08AI6 406 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 TEPPQ6URK8 271 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 TMEM217Q8N7C4 229 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 TMEM147Q9BVK8 224 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 TP53TG1Q9Y2A0 90 aa11.46□□□□□ -0.57
HMGA1-206ENST00000478214 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 ZNF98A6NK75 572 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 LINC00869P0C866 280 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 STHQ8IWL8 128 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 TMEM252Q8N6L7 170 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 RNF183Q96D59 192 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 SLC25A32Q9H2D1 315 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 SLC25A22Q9H936 323 aa11.45□□□□□ -0.58
HMGA1-206ENST00000478214 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
HMGA1-206ENST00000478214 KMT2CQ8NEZ4 4911 aaKnown RBP11.45□□□□□ -0.58
HMGA1-206ENST00000478214 SSNA1O43805 119 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 LYL1P12980 280 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 SULT1A1P50225 295 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 SNRPD3P62318 126 aaKnown RBP11.44□□□□□ -0.58
HMGA1-206ENST00000478214 ACTL10Q5JWF8 245 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 TRPT1Q86TN4 253 aaKnown RBP11.44□□□□□ -0.58
HMGA1-206ENST00000478214 MGST2Q99735 147 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 SCRT1Q9BWW7 348 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 NMES1Q9C002 83 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 SEPSECSQ9HD40 501 aaKnown RBP11.44□□□□□ -0.58
HMGA1-206ENST00000478214 HIGD1AQ9Y241 93 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 CSMD3Q7Z407 3707 aa11.44□□□□□ -0.58
HMGA1-206ENST00000478214 H3BRN7 92 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 AGPAT2O15120 278 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 HYPMO75409 117 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 CA1P00915 261 aaPredicted RBP11.43□□□□□ -0.58
HMGA1-206ENST00000478214 OR5G3P0C626 314 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 H2BFSP57053 126 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 PLP1P60201 277 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 RAP2BP61225 183 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 LRRC37A5PQ49AS3 106 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 CASC10Q5T4H9 136 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 SHANK2-AS3Q9BTD1 123 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 SLC25A39Q9BZJ4 359 aaPredicted RBP11.43□□□□□ -0.58
HMGA1-206ENST00000478214 ARL6Q9H0F7 186 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 UQCC1Q9NVA1 299 aa11.43□□□□□ -0.58
HMGA1-206ENST00000478214 STARD9Q9P2P6 4700 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 H0YIZ8 118 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 SOCS3O14543 225 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 GALR1P47211 349 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 CYCSP99999 105 aaKnown RBP11.42□□□□□ -0.58
HMGA1-206ENST00000478214 ZFAND6Q6FIF0 208 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 STX12Q86Y82 276 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 C17orf77Q96MU5 243 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 UHRF2Q96PU4 802 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 RSG1Q9BU20 258 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 OR5AC2Q9NZP5 309 aa11.42□□□□□ -0.58
HMGA1-206ENST00000478214 AGRNO00468 2067 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 RLN2P04090 185 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 GIG44P09565 113 aaPredicted RBP11.41□□□□□ -0.58
HMGA1-206ENST00000478214 S100A7P31151 101 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 S100A11P31949 105 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 ID1P41134 155 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 CAMLGP49069 296 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 DEFB1P60022 68 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 VWC2Q2TAL6 325 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 LINC00052Q96N35 136 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 WDR83OSQ9Y284 106 aa11.41□□□□□ -0.58
HMGA1-206ENST00000478214 A0A0J9YWU9 116 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 E5RGE8 158 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 PTTG1O95997 202 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 PSMB3P49720 205 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 HBG1P69891 147 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 HBG2P69892 147 aa11.4□□□□□ -0.58
HMGA1-206ENST00000478214 NHLH2Q02577 135 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms