RNA–Protein interactions for RNA: ENST00000478082.5

PLOD3-212, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 1,585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-212ENST00000478082 OXA1LQ15070 435 aa13.85□□□□□ -0.19
PLOD3-212ENST00000478082 TEPPQ6URK8 271 aa13.85□□□□□ -0.19
PLOD3-212ENST00000478082 BPIFCQ8NFQ6 507 aa13.85□□□□□ -0.19
PLOD3-212ENST00000478082 GGACTQ9BVM4 153 aa13.85□□□□□ -0.19
PLOD3-212ENST00000478082 RETNQ9HD89 108 aa13.85□□□□□ -0.19
PLOD3-212ENST00000478082 K7EQG2 157 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 PFDN1O60925 122 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 CD5P06127 495 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 LINC00869P0C866 280 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 PAFAH1B2P68402 229 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 EWSR1Q01844 656 aaKnown RBP eCLIP13.84□□□□□ -0.19
PLOD3-212ENST00000478082 LEMD1Q68G75 181 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 SIGLEC15Q6ZMC9 328 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 TM2D3Q9BRN9 247 aa13.84□□□□□ -0.19
PLOD3-212ENST00000478082 UBE2L5PA0A1B0GUS4 154 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 E5RGE8 158 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 AGPAT2O15120 278 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 NHLRC4P0CG21 123 aaPredicted RBP13.83□□□□□ -0.19
PLOD3-212ENST00000478082 VWC2Q2TAL6 325 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 Q6ZNX1 250 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 STX12Q86Y82 276 aa13.83□□□□□ -0.19
PLOD3-212ENST00000478082 RLN2P04090 185 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 DEFB131AP59861 70 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 UHRF2Q96PU4 802 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 SCRT1Q9BWW7 348 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 MED28Q9H204 178 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 SLC25A22Q9H936 323 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 UQCC1Q9NVA1 299 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 SLC45A2Q9UMX9 530 aa13.83□□□□□ -0.2
PLOD3-212ENST00000478082 HELTA6NFD8 242 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 ZNF688P0C7X2 276 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 S100A11P31949 105 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 TMEM147Q9BVK8 224 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 SLC25A32Q9H2D1 315 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 MBD2Q9UBB5 411 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 WDR83OSQ9Y284 106 aa13.82□□□□□ -0.2
PLOD3-212ENST00000478082 TRAV2A0A0B4J234 112 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 ZNF98A6NK75 572 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 CFDP00746 253 aaPredicted RBP13.81□□□□□ -0.2
PLOD3-212ENST00000478082 RPL35AP18077 110 aaKnown RBP13.81□□□□□ -0.2
PLOD3-212ENST00000478082 OR5C1Q8NGR4 320 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 C17orf77Q96MU5 243 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 FAM110AQ9BQ89 295 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 ARL6Q9H0F7 186 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 U3KQK5 164 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 TENM3Q9P273 2699 aa13.81□□□□□ -0.2
PLOD3-212ENST00000478082 LOC102724200A0A096LPH7 203 aaPredicted RBP13.8□□□□□ -0.2
PLOD3-212ENST00000478082 PLP1P60201 277 aa13.8□□□□□ -0.2
PLOD3-212ENST00000478082 MIC13Q5XKP0 118 aa13.8□□□□□ -0.2
PLOD3-212ENST00000478082 RCHY1Q96PM5 261 aa13.8□□□□□ -0.2
PLOD3-212ENST00000478082 GGTLC1Q9BX51 225 aa13.8□□□□□ -0.2
PLOD3-212ENST00000478082 SLC25A39Q9BZJ4 359 aaPredicted RBP13.8□□□□□ -0.2
PLOD3-212ENST00000478082 H3BRN7 92 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 OR5G3P0C626 314 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 CAMLGP49069 296 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 SELENOTP62341 195 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 HBG1P69891 147 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 HBG2P69892 147 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 BAXQ07812 192 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 CLINT1Q14677 625 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 Q5BKY6 102 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 ZNF546Q86UE3 836 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 OR8I2Q8N0Y5 310 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 THAP6Q8TBB0 222 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 HIGD1AQ9Y241 93 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 HYPMO75409 117 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 FGF7P21781 194 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 AP2S1P53680 142 aaPredicted RBP13.79□□□□□ -0.2
PLOD3-212ENST00000478082 C1orf194Q5T5A4 169 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 SLC25A31Q9H0C2 315 aa13.79□□□□□ -0.2
PLOD3-212ENST00000478082 NUP62P37198 522 aaPredicted RBP13.78□□□□□ -0.2
PLOD3-212ENST00000478082 DEFB1P60022 68 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 PSMG4Q5JS54 123 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 MORN5Q5VZ52 161 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 TMEM37Q8WXS4 190 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 SHANK2-AS3Q9BTD1 123 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 ARV1Q9H2C2 271 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 ZMAT4Q9H898 229 aa13.78□□□□□ -0.2
PLOD3-212ENST00000478082 KNCNA6PVL3 124 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 SOCS3O14543 225 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 LYL1P12980 280 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PRR20EP86478 221 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PRR20CP86479 221 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PRR20DP86480 221 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PRR20BP86481 221 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PRR20AP86496 221 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 ATP6V1FQ16864 119 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PFDN2Q9UHV9 154 aa13.77□□□□□ -0.21
PLOD3-212ENST00000478082 PET100P0DJ07 73 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 RAP2BP61225 183 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 OPCMLQ14982 345 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 NBEAL2Q6ZNJ1 2754 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 SPATA25Q9BR10 227 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 SMIM3Q9BZL3 60 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 HSPB11Q9Y547 144 aa13.76□□□□□ -0.21
PLOD3-212ENST00000478082 RPL12P30050 165 aaKnown RBP13.75□□□□□ -0.21
PLOD3-212ENST00000478082 CMC4P56277 68 aaPredicted RBP13.75□□□□□ -0.21
PLOD3-212ENST00000478082 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms