RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 OR8I2Q8N0Y5 310 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 CCDC71LQ8N9Z2 235 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 LHFPL5Q8TAF8 219 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 C16orf92Q96LL3 132 aa11.39□□□□□ -0.59
APOBEC3F-203ENST00000476513 IGKV1D-37A0A075B6S9 117 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 ZFP92A6NM28 416 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 B3GALNT1O75752 331 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 CDS2O95674 445 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 FUSP35637 526 aaKnown RBP eCLIP11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 CNN1P51911 297 aaKnown RBP11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 BAP18Q8IXM2 172 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 ARRDC1Q8N5I2 433 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 FRZBQ92765 325 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 UPK3BQ9BT76 320 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 TMEM222Q9H0R3 208 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 PGPEP1Q9NXJ5 209 aa11.38□□□□□ -0.59
APOBEC3F-203ENST00000476513 SMIM31A0A1B0GVY4 71 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 MEOX2P50222 304 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 SELENOHQ8IZQ5 122 aaKnown RBP11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 OR13C8Q8NGS7 320 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 ZFAND1Q8TCF1 268 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 PPP1R14BQ96C90 147 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 C17orf77Q96MU5 243 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 ZNF586Q9NXT0 402 aa11.37□□□□□ -0.59
APOBEC3F-203ENST00000476513 CD3DP04234 171 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 OR5AC1P0C628 307 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 MEF2DQ14814 521 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 NEDD8Q15843 81 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 ESRGQ1W209 222 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 Q6ZRN7 208 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 RBPMSQ93062 196 aaKnown RBP11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 GNPNAT1Q96EK6 184 aaPredicted RBP11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 PTTG2Q9NZH5 202 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 COMMD3Q9UBI1 195 aa11.36□□□□□ -0.59
APOBEC3F-203ENST00000476513 TRAV12-2A0A075B6T6 113 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 TRAV26-1A0A087WT03 109 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 SNRPGP15A8MWD9 76 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 DUSP14O95147 198 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 APOA1P02647 267 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 LINC00315P59091 139 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 OR5I1Q13606 314 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 OR2F1Q13607 317 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 GAMTQ14353 236 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 RNASE12Q5GAN4 147 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 TERB2Q8NHR7 220 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 RXFP4Q8TDU9 374 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 RSG1Q9BU20 258 aa11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 MRPS16Q9Y3D3 137 aaKnown RBP11.35□□□□□ -0.59
APOBEC3F-203ENST00000476513 TEX13DA0A0J9YY54 714 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 GALR1P47211 349 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 OR4D10Q8NGI6 311 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 MARCH1Q8TCQ1 289 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 LINC01587Q99440 93 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 SLC25A32Q9H2D1 315 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 NOP10Q9NPE3 64 aaKnown RBP11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 TIMM8BQ9Y5J9 83 aaPredicted RBP11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 U3KQ87 197 aa11.34□□□□□ -0.59
APOBEC3F-203ENST00000476513 A0A0J9YY99 117 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 FABP1P07148 127 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 HTN1P15515 57 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 M6PRP20645 277 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 TAS2R60P59551 318 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 LSM3P62310 102 aaKnown RBP11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 SCGB2B2Q4G0G5 96 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 TMEM268Q5VZI3 342 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 IGFL4Q6B9Z1 124 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 LGI3Q8N145 548 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 C16orf74Q96GX8 76 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 SLC35E1Q96K37 410 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 SLC25A39Q9BZJ4 359 aaPredicted RBP11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 MDFICQ9P1T7 246 aa11.33□□□□□ -0.6
APOBEC3F-203ENST00000476513 TRAV8-2A0A0B4J237 113 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 BOLA2-SMG1P6H3BVE0 249 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 GPX4P36969 197 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 CDPF1Q6NVV7 123 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 TMEM256Q8N2U0 113 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 RNF182Q8N6D2 247 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 RTBDNQ9BSG5 229 aaPredicted RBP11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 NAA60Q9H7X0 242 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 SLC25A22Q9H936 323 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 CACFD1Q9UGQ2 172 aa11.32□□□□□ -0.6
APOBEC3F-203ENST00000476513 VPS13BQ7Z7G8 4022 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 GABARAPH6UMI1 98 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 ZNF701M0R085 212 aaPredicted RBP11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 GABARAPO95166 117 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 TNFAIP8O95379 198 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 SULT1A3P0DMM9 295 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 SULT1A4P0DMN0 295 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 TBPP20226 339 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 KRTAP10-1P60331 282 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 TMEM144Q7Z5S9 345 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 OR10J6PQ8NGY7 276 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 OR52I2Q8NH67 350 aa11.31□□□□□ -0.6
APOBEC3F-203ENST00000476513 DTD1Q8TEA8 209 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms