RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 FBXL17Q9UF56 701 aa11.33□□□□□ -0.6
SNX13-207ENST00000475800 SELENOKQ9Y6D0 94 aa11.33□□□□□ -0.6
SNX13-207ENST00000475800 IGHV3-66A0A0C4DH42 116 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 DNASE2O00115 360 aaPredicted RBP11.32□□□□□ -0.6
SNX13-207ENST00000475800 AGPAT2O15120 278 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 MPDU1O75352 247 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 CD7P09564 240 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 LYL1P12980 280 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 PLP1P60201 277 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 RPL11P62913 178 aaKnown RBP11.32□□□□□ -0.6
SNX13-207ENST00000475800 GLMPQ8WWB7 406 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 WWC2-AS2Q96NR7 200 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 ASCL2Q99929 193 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 RNF24Q9Y225 148 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 WDR83OSQ9Y284 106 aa11.32□□□□□ -0.6
SNX13-207ENST00000475800 OR11H12B2RN74 326 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 LINC00869P0C866 280 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 IGHV4-30-4P0DP06 118 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 NHLH2Q02577 135 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 OR5C1Q8NGR4 320 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 CHAC2Q8WUX2 184 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
SNX13-207ENST00000475800 UBE2L5PA0A1B0GUS4 154 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 HYPMO75409 117 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 ORM2P19652 201 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 GATA2P23769 480 aaPredicted RBP11.3□□□□□ -0.6
SNX13-207ENST00000475800 RPL12P30050 165 aaKnown RBP11.3□□□□□ -0.6
SNX13-207ENST00000475800 CAMLGP49069 296 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 SIGLEC15Q6ZMC9 328 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 OR1B1Q8NGR6 318 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 MGST2Q99735 147 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 MS4A6AQ9H2W1 248 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 HIGD1AQ9Y241 93 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 HSPB11Q9Y547 144 aa11.3□□□□□ -0.6
SNX13-207ENST00000475800 IGKV3-7A0A075B6H7 116 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 TMEM182Q6ZP80 229 aaPredicted RBP11.29□□□□□ -0.6
SNX13-207ENST00000475800 Q6ZRG5 221 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 OR8I2Q8N0Y5 310 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 GBGT1Q8N5D6 347 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 STXBP6Q8NFX7 210 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 GPR82Q96P67 336 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 C19orf73Q9NVV2 129 aa11.29□□□□□ -0.6
SNX13-207ENST00000475800 ELOA3CA0A087WX78 387 aaPredicted RBP11.28□□□□□ -0.6
SNX13-207ENST00000475800 OR5G3P0C626 314 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 FGF7P21781 194 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 RPL29P47914 159 aaKnown RBP11.28□□□□□ -0.6
SNX13-207ENST00000475800 TFPI2P48307 235 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 CLINT1Q14677 625 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 ATP5SQ99766 215 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 GGTLC1Q9BX51 225 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 SEPSECSQ9HD40 501 aaKnown RBP11.28□□□□□ -0.6
SNX13-207ENST00000475800 NRN1Q9NPD7 142 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 TENM3Q9P273 2699 aa11.28□□□□□ -0.6
SNX13-207ENST00000475800 ZNF98A6NK75 572 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 H3BRN7 92 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 K7EQG2 157 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 NHLRC4P0CG21 123 aaPredicted RBP11.27□□□□□ -0.61
SNX13-207ENST00000475800 GALR1P47211 349 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 OPCMLQ14982 345 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 SAMD13Q5VXD3 122 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 WFDC3Q8IUB2 231 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 DEFB125Q8N687 156 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 STPG3Q8N7X2 389 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 OR2T35Q8NGX2 323 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 SHANK2-AS3Q9BTD1 123 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 SLC25A39Q9BZJ4 359 aaPredicted RBP11.27□□□□□ -0.61
SNX13-207ENST00000475800 ARL6Q9H0F7 186 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 SRD5A3Q9H8P0 318 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 DOK5Q9P104 306 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 U3KQK5 164 aa11.27□□□□□ -0.61
SNX13-207ENST00000475800 COX7A2P2O60397 106 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 IFNA5P01569 189 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 B2MP61769 119 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PRR20EP86478 221 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PRR20CP86479 221 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PRR20DP86480 221 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PRR20BP86481 221 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PRR20AP86496 221 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 ZNF709Q8N972 641 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 OR1L4Q8NGR5 311 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 DCANP1Q8TF63 244 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 PFDN5Q99471 154 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 NPCDR1Q9BY65 106 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 ARV1Q9H2C2 271 aa11.26□□□□□ -0.61
SNX13-207ENST00000475800 C17orf112F2Z3M2 114 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 RPL7P18124 248 aaKnown RBP11.25□□□□□ -0.61
SNX13-207ENST00000475800 MEOX2P50222 304 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 SNRPD3P62318 126 aaKnown RBP11.25□□□□□ -0.61
SNX13-207ENST00000475800 MIC13Q5XKP0 118 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 INO80EQ8NBZ0 244 aaPredicted RBP11.25□□□□□ -0.61
SNX13-207ENST00000475800 AQP10Q96PS8 301 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 PARD6GQ9BYG4 376 aaPredicted RBP11.25□□□□□ -0.61
SNX13-207ENST00000475800 WDR61Q9GZS3 305 aaKnown RBP11.25□□□□□ -0.61
SNX13-207ENST00000475800 WFDC10AQ9H1F0 79 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 SLC25A22Q9H936 323 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 MAP6D1Q9H9H5 199 aa11.25□□□□□ -0.61
SNX13-207ENST00000475800 DNAJC4Q9NNZ3 241 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms