RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 SRPXP78539 464 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 GDF5OSQ5U4N7 250 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 GSG1LQ6UXU4 331 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 TMED4Q7Z7H5 227 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 PBDC1Q9BVG4 233 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 WDR12Q9GZL7 423 aaKnown RBP6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 XCL2Q9UBD3 114 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 CELA1Q9UNI1 258 aa6.32□□□□□ -1.4
TNFRSF9-202ENST00000474475 IGHV4-4A0A075B6R2 117 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 TRAV10A0A0B4J240 114 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 DUXBA0A1W2PPF3 345 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 NOL3O60936 208 aaKnown RBP6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 HLA-DRB4P13762 266 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 NKX2-1P43699 371 aaPredicted RBP6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 C12orf74Q32Q52 190 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 OR8G2PQ6IF36 304 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF767PQ75MW2 155 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 LRTM2Q8N967 370 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 SLC35E1Q96K37 410 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 C1QTNF4Q9BXJ3 329 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 V9GYH0 126 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 HLA-DRB4X5D2U9 266 aa6.31□□□□□ -1.4
TNFRSF9-202ENST00000474475 IGKV1OR2-108A0A075B7D4 117 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 SOCS3O14543 225 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 IGKV3-20P01619 116 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 IAPPP10997 89 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 FAUP35544 74 aaKnown RBP6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 NUP62P37198 522 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 LYZP61626 148 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 NUTF2P61970 127 aaKnown RBP6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 OR2F1Q13607 317 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF79Q15937 498 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 PYDC2Q56P42 97 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 TMEM128Q5BJH2 165 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF705AQ6ZN79 300 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 TOMM5Q8N4H5 51 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 LINC00052Q96N35 136 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 KRTAP4-12Q9BQ66 201 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 SCRT1Q9BWW7 348 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 KRTAP9-9Q9BYP9 154 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 KRTAP9-4Q9BYQ2 154 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 SAV1Q9H4B6 383 aaPredicted RBP6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 KMT2AQ03164 3969 aa6.3□□□□□ -1.4
TNFRSF9-202ENST00000474475 DEFB131BA0A096LNP1 70 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 PIGBOS1A0A0B4J2F0 54 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF705FA8MVS1 300 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 SNRPGP15A8MWD9 76 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 PRSS46E5RG02 174 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 SFT2D2O95562 160 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 FABP1P07148 127 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF705DP0CH99 300 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF705BP0CI00 300 aaPredicted RBP6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 SLC25A6P12236 298 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 PSMB3P49720 205 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 FXYD7P58549 80 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 AP3S2P59780 193 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 RAB11AP62491 216 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 PPP1R1AQ13522 171 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 C1orf194Q5T5A4 169 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 FOXI2Q6ZQN5 318 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 THAP8Q8NA92 274 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 TRGV9Q99603 122 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 RNF126Q9BV68 326 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 MAGT1Q9H0U3 335 aa6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 PAIP2BQ9ULR5 123 aaKnown RBP6.29□□□□□ -1.4
TNFRSF9-202ENST00000474475 FRAS1Q86XX4 4008 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 F6UB75 175 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 WRBO00258 174 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 SYNGR2O43760 224 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 AMBPP02760 352 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 HOXB5P09067 269 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 ID1P41134 155 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 GGNBP1Q5YKI7 109 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 TMEM182Q6ZP80 229 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 CCDC190Q86UF4 302 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 OR8I2Q8N0Y5 310 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 CENPSQ8N2Z9 138 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 ZNF709Q8N972 641 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 OR4B1Q8NGF8 309 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 COQ8AQ8NI60 647 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 PPP1R14BQ96C90 147 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 C20orf173Q96LM9 149 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 C17orf77Q96MU5 243 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 NEU1Q99519 415 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 SLC25A21Q9BQT8 299 aaPredicted RBP6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 SLC35B3Q9H1N7 401 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 TMED3Q9Y3Q3 217 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
TNFRSF9-202ENST00000474475 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 SMIM9A6NGZ8 99 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 H3BP45 60 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 ISLRO14498 428 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 MED6O75586 246 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 GATA2P23769 480 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 EMP1P54849 157 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 PAX9P55771 341 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 FAM78BQ5VT40 261 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 DEDD2Q8WXF8 326 aa6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 CIB3Q96Q77 187 aaPredicted RBP6.27□□□□□ -1.41
TNFRSF9-202ENST00000474475 SLC25A32Q9H2D1 315 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms