RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 MAGT1Q9H0U3 335 aa14.7□□□□□ -0.06
PDLIM4-206ENST00000474421 SAV1Q9H4B6 383 aaPredicted RBP14.7□□□□□ -0.06
PDLIM4-206ENST00000474421 APLNQ9ULZ1 77 aa14.7□□□□□ -0.06
PDLIM4-206ENST00000474421 SLC45A2Q9UMX9 530 aa14.7□□□□□ -0.06
PDLIM4-206ENST00000474421 NAP1L6A6NFF2 107 aa14.69□□□□□ -0.06
PDLIM4-206ENST00000474421 WRBO00258 174 aa14.69□□□□□ -0.06
PDLIM4-206ENST00000474421 ISLRO14498 428 aa14.69□□□□□ -0.06
PDLIM4-206ENST00000474421 MEOX2P50222 304 aa14.69□□□□□ -0.06
PDLIM4-206ENST00000474421 IGKV1OR2-108A0A075B7D4 117 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 GALR1P47211 349 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 SPANXN5Q5MJ07 72 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 BPIFCQ8NFQ6 507 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 NEU1Q99519 415 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 SRRQ9GZT4 340 aa14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 STRAPQ9Y3F4 350 aaKnown RBP14.68□□□□□ -0.06
PDLIM4-206ENST00000474421 SMIM9A6NGZ8 99 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 PRSS46E5RG02 174 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 SOCS3O14543 225 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 GDF5OSQ5U4N7 250 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 TRIQKQ629K1 86 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 EBLN2Q6P2I7 272 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 ZNF705AQ6ZN79 300 aaPredicted RBP14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 RNF126Q9BV68 326 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 RBM38Q9H0Z9 239 aaKnown RBP14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 DNAH6Q9C0G6 4158 aa14.67□□□□□ -0.06
PDLIM4-206ENST00000474421 TMEM189A5PLL7 270 aa14.66□□□□□ -0.06
PDLIM4-206ENST00000474421 AKR1C1Q04828 323 aa14.66□□□□□ -0.06
PDLIM4-206ENST00000474421 DNAH10Q8IVF4 4471 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 IGHV4-4A0A075B6R2 117 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 C9orf170A2RU37 121 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 ZNF705FA8MVS1 300 aaPredicted RBP14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 NDUFB6O95139 128 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 IFNA21P01568 189 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 IGKV3-20P01619 116 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 ZNF705DP0CH99 300 aaPredicted RBP14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 ZNF705BP0CI00 300 aaPredicted RBP14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 PAX9P55771 341 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 ID3Q02535 119 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 C12orf74Q32Q52 190 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 OR4B1Q8NGF8 309 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 OR4D5Q8NGN0 318 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 C16orf92Q96LL3 132 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 GPR82Q96P67 336 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 TMEM147Q9BVK8 224 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 RPRMQ9NS64 109 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 CELA1Q9UNI1 258 aa14.65□□□□□ -0.06
PDLIM4-206ENST00000474421 DEFB131BA0A096LNP1 70 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 ZNF98A6NK75 572 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 CENPXA8MT69 81 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 PRR20EP86478 221 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 PRR20CP86479 221 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 PRR20DP86480 221 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 PRR20BP86481 221 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 PRR20AP86496 221 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 OR1B1Q8NGR6 318 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 SLC25A32Q9H2D1 315 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 SLC25A22Q9H936 323 aa14.64□□□□□ -0.07
PDLIM4-206ENST00000474421 H3BP45 60 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 AMBPP02760 352 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 SPART-AS1P0CW21 52 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 ORM2P19652 201 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 DEFB1P60022 68 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 PSG9Q00887 426 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 ACOT7LQ6ZUV0 252 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 TMEM144Q7Z5S9 345 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 ZNF709Q8N972 641 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 RSG1Q9BU20 258 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 GOLT1BQ9Y3E0 138 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 RFNGQ9Y644 331 aa14.63□□□□□ -0.07
PDLIM4-206ENST00000474421 TEX48A0A1B0GUV7 120 aa14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 ADAP1O75689 374 aa14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 FXYD7P58549 80 aa14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 POLR2GP62487 172 aaKnown RBP eCLIP14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 BAK1Q16611 211 aa14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 PSENENQ9NZ42 101 aa14.62□□□□□ -0.07
PDLIM4-206ENST00000474421 IGHV3OR16-12A0A075B7B8 117 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 A0A0J9YX75 114 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 OR4E1P0C645 316 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 FAM78BQ5VT40 261 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 ZNF767PQ75MW2 155 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 S100A7AQ86SG5 101 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 SMIM8Q96KF7 97 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 C7orf50Q9BRJ6 194 aaKnown RBP14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 DOK5Q9P104 306 aa14.61□□□□□ -0.07
PDLIM4-206ENST00000474421 SMCO3A2RU48 225 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 IL5P05113 134 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 GATA2P23769 480 aaPredicted RBP14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 SELENOTP62341 195 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 CNPY1Q3B7I2 92 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 C4orf46Q504U0 113 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 CYP2G1PQ6ZSU1 146 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 NDUFAF3Q9BU61 184 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 SLC35B3Q9H1N7 401 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 FLVCR2Q9UPI3 526 aa14.6□□□□□ -0.07
PDLIM4-206ENST00000474421 F6UB75 175 aa14.59□□□□□ -0.07
PDLIM4-206ENST00000474421 SSSCA1O60232 199 aa14.59□□□□□ -0.07
PDLIM4-206ENST00000474421 EMP1P54849 157 aa14.59□□□□□ -0.07
PDLIM4-206ENST00000474421 RAP2BP61225 183 aa14.59□□□□□ -0.07
PDLIM4-206ENST00000474421 TMEM182Q6ZP80 229 aaPredicted RBP14.59□□□□□ -0.07
PDLIM4-206ENST00000474421 C20orf173Q96LM9 149 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms