RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 TMEM147Q9BVK8 224 aa10.52□□□□□ -0.73
VAMP4-203ENST00000474047 DNAH9Q9NYC9 4486 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 C3orf84H3BNL1 204 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 SPRY2O43597 315 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 LYL1P12980 280 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 DEFB135Q30KP9 77 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 TEPPQ6URK8 271 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 Q6ZWC4 215 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 MARVELD1Q9BSK0 173 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 CSTL1Q9H114 145 aa10.51□□□□□ -0.73
VAMP4-203ENST00000474047 FNDC10F2Z333 226 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 SSNA1O43805 119 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 RLN2P04090 185 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 RAP2BP61225 183 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 SELENOTP62341 195 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 RAB32Q13637 225 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 PSMG4Q5JS54 123 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 GGACTQ9BVM4 153 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 SLC25A22Q9H936 323 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 FAM24AA6NFZ4 105 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 DEDDO75618 318 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 SIX6O95475 246 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 OR5G3P0C626 314 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 ID1P41134 155 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 OVOL2Q9BRP0 275 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 DOK5Q9P104 306 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 SLC45A2Q9UMX9 530 aa10.5□□□□□ -0.73
VAMP4-203ENST00000474047 NBEAL2Q6ZNJ1 2754 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 HYPMO75409 117 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 CST7O76096 145 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 LINC00869P0C866 280 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 GALR1P47211 349 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 CYCSP99999 105 aaKnown RBP10.49□□□□□ -0.73
VAMP4-203ENST00000474047 SLC38A11Q08AI6 406 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 RAB31Q13636 194 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 ACTL10Q5JWF8 245 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 TMEM182Q6ZP80 229 aaPredicted RBP10.49□□□□□ -0.73
VAMP4-203ENST00000474047 STX12Q86Y82 276 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 TMEM217Q8N7C4 229 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 EDA2RQ9HAV5 297 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 HIGD1AQ9Y241 93 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 TP53TG1Q9Y2A0 90 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 STAB2Q8WWQ8 2551 aa10.49□□□□□ -0.73
VAMP4-203ENST00000474047 KNCNA6PVL3 124 aa10.48□□□□□ -0.73
VAMP4-203ENST00000474047 HBG1P69891 147 aa10.48□□□□□ -0.73
VAMP4-203ENST00000474047 HBG2P69892 147 aa10.48□□□□□ -0.73
VAMP4-203ENST00000474047 ARL16Q0P5N6 197 aa10.48□□□□□ -0.73
VAMP4-203ENST00000474047 LINC00052Q96N35 136 aa10.48□□□□□ -0.73
VAMP4-203ENST00000474047 TENM3Q9P273 2699 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 CA1P00915 261 aaPredicted RBP10.47□□□□□ -0.73
VAMP4-203ENST00000474047 SULT1A1P50225 295 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 LRRC37A5PQ49AS3 106 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 ZNF546Q86UE3 836 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 IL17DQ8TAD2 202 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 RNF183Q96D59 192 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 NMES1Q9C002 83 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 ARL6Q9H0F7 186 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
VAMP4-203ENST00000474047 LYRM2Q9NU23 88 aaPredicted RBP10.47□□□□□ -0.73
VAMP4-203ENST00000474047 S100A11P31949 105 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 IL15RAQ13261 267 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 GPR82Q96P67 336 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 UQCC1Q9NVA1 299 aa10.47□□□□□ -0.73
VAMP4-203ENST00000474047 AGPAT2O15120 278 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 SAMD13Q5VXD3 122 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 TMEM252Q8N6L7 170 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 RSG1Q9BU20 258 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 SLC25A39Q9BZJ4 359 aaPredicted RBP10.46□□□□□ -0.74
VAMP4-203ENST00000474047 RNF24Q9Y225 148 aa10.46□□□□□ -0.74
VAMP4-203ENST00000474047 IGSF23A1L1A6 192 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 ATF4P18848 351 aaPredicted RBP10.45□□□□□ -0.74
VAMP4-203ENST00000474047 MEOX2P50222 304 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 FGL1Q08830 312 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 PXDC1Q5TGL8 231 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 MORN3Q6PF18 240 aaPredicted RBP10.45□□□□□ -0.74
VAMP4-203ENST00000474047 GATAD1Q8WUU5 269 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 C16orf92Q96LL3 132 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 SCRT1Q9BWW7 348 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 SLC25A31Q9H0C2 315 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 SLC25A32Q9H2D1 315 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 C11orf1Q9H5F2 150 aa10.45□□□□□ -0.74
VAMP4-203ENST00000474047 E5RGE8 158 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 SPP1P10451 314 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 CAMLGP49069 296 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 PSMB3P49720 205 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 PLP1P60201 277 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 NUTF2P61970 127 aaKnown RBP10.44□□□□□ -0.74
VAMP4-203ENST00000474047 BAXQ07812 192 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 ATP6V1FQ16864 119 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 CASC10Q5T4H9 136 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 TRPT1Q86TN4 253 aaKnown RBP10.44□□□□□ -0.74
VAMP4-203ENST00000474047 RARRES2Q99969 163 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 SHANK2-AS3Q9BTD1 123 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 UBE2L5PA0A1B0GUS4 154 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 H3BRN7 92 aa10.44□□□□□ -0.74
VAMP4-203ENST00000474047 ISLRO14498 428 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms