RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
COL6A3-210ENST00000473258 KIF13AQ9H1H9 1805 aa7.39□□□□□ -1.23
COL6A3-210ENST00000473258 ARMS2P0C7Q2 107 aa7.39□□□□□ -1.23
COL6A3-210ENST00000473258 RNASE4P34096 147 aaKnown RBP7.39□□□□□ -1.23
COL6A3-210ENST00000473258 CSDC2Q9Y534 153 aaKnown RBP7.39□□□□□ -1.23
COL6A3-210ENST00000473258 LAMB4A4D0S4 1761 aa7.39□□□□□ -1.23
COL6A3-210ENST00000473258 IGHV5-51A0A0C4DH38 117 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 ELANEP08246 267 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 TM4SF4P48230 202 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 MP68P56378 58 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 MRPS21P82921 87 aaKnown RBP7.38□□□□□ -1.23
COL6A3-210ENST00000473258 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
COL6A3-210ENST00000473258 CCL4L1Q8NHW4 92 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 MED1Q15648 1581 aaPredicted RBP7.38□□□□□ -1.23
COL6A3-210ENST00000473258 LMO7Q8WWI1 1683 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 SMIM26A0A096LP01 95 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 IGHV3-35A0A0C4DH35 117 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 DUSP14O95147 198 aaKnown RBP7.38□□□□□ -1.23
COL6A3-210ENST00000473258 Q8N8P6 123 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 V9GYV3 84 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 SHROOM3Q8TF72 1996 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 IGHV3OR16-13A0A075B7E8 117 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 IGHV3-74A0A0B4J1X5 117 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 TRBV10-2A0A0K0K1G8 114 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 ADARB2-AS1A8MUL3 147 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 ZNF876PQ49A33 203 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 C2orf66Q6UXQ4 117 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 TRGV5A0A0B4J1U4 118 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 RPL39P5Q59GN2 51 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 RASL10BQ96S79 203 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 C12orf77C9JDV5 145 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 IGKV3-20P01619 116 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 GFERP55789 205 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 PMAIP1Q13794 54 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 DKK2Q9UBU2 259 aa7.38□□□□□ -1.23
COL6A3-210ENST00000473258 NALCNQ8IZF0 1738 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 MPDZO75970 2070 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 TRAV13-2A0A0B4J235 113 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 ATP5EP56381 51 aaPredicted RBP7.37□□□□□ -1.23
COL6A3-210ENST00000473258 AKAP6Q13023 2319 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 J3QQQ9 107 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 LYPD3O95274 346 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 CRYGCP07315 174 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 HOXD3P31249 432 aaPredicted RBP7.37□□□□□ -1.23
COL6A3-210ENST00000473258 ZNF493Q6ZR52 646 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 SLC25A29Q8N8R3 303 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 TMEM141Q96I45 108 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 UCN2Q96RP3 112 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 IGLC6P0CF74 106 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 PVRIGQ6DKI7 326 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 GFI1Q99684 422 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 ZNF492Q9P255 531 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 CCL26Q9Y258 94 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 C15orf61A6NNL5 157 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 H0YJW9 148 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 K7EN84 100 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 M0R1W7 72 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 NUPR1O60356 82 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 NDUFS7O75251 213 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 TRBV12-3P01733 135 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 FAM19A5Q7Z5A7 132 aaPredicted RBP7.37□□□□□ -1.23
COL6A3-210ENST00000473258 VSIG2Q96IQ7 327 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
COL6A3-210ENST00000473258 SMIM27A0A1W2PRY6 76 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 WIPF3A6NGB9 483 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 H0Y8X5 98 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 TRGV8A0A0C4DH27 118 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 CCL11P51671 97 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 CRYBA2P53672 197 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 NRN1LQ496H8 165 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 C16orf47Q6ZP98 133 aaPredicted RBP7.36□□□□□ -1.23
COL6A3-210ENST00000473258 IGFBPL1Q8WX77 278 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 ATRXP46100 2492 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 C6orf226Q5I0X4 101 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 LINC01545Q5VT33 79 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 LEAP2Q969E1 77 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 CCL13Q99616 98 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 NDUFB8O95169 186 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 IGHMP01871 453 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 LTBRP36941 435 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 C8orf46Q8TAG6 207 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 C21orf62Q9NYP8 219 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 VPREB3Q9UKI3 123 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 DOCK10Q96BY6 2186 aa7.36□□□□□ -1.23
COL6A3-210ENST00000473258 PLCE1Q9P212 2302 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 SH2D1AO60880 128 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 PAQR4Q8N4S7 273 aaPredicted RBP7.35□□□□□ -1.23
COL6A3-210ENST00000473258 CACNA1IQ9P0X4 2223 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 CXorf51AA0A1B0GTR3 108 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 NTN3O00634 580 aaPredicted RBP7.35□□□□□ -1.23
COL6A3-210ENST00000473258 NTF4P34130 210 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 ZNF826PQ6ZT77 177 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 PRO0628Q9UI54 55 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 DPH3Q96FX2 82 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 ORMDL1Q9P0S3 153 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 ZNF501Q96CX3 271 aaPredicted RBP7.35□□□□□ -1.23
COL6A3-210ENST00000473258 PRDM6Q9NQX0 595 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 TRIOBPQ9H2D6 2365 aa7.35□□□□□ -1.23
COL6A3-210ENST00000473258 A0A087WX48 190 aa7.34□□□□□ -1.23
COL6A3-210ENST00000473258 LOC101059948A0A1B0GTJ6 334 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms