RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 STXBP6Q8NFX7 210 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 RPP21Q9H633 154 aaKnown RBP16.9■□□□□ 0.3
COL18A1-207ENST00000473212 KLF12Q9Y4X4 402 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 VMA21Q3ZAQ7 101 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 SSX8Q7RTT4 187 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 MLST8Q9BVC4 326 aa16.9■□□□□ 0.3
COL18A1-207ENST00000473212 GTSF1Q8WW33 167 aa16.89■□□□□ 0.29
COL18A1-207ENST00000473212 MRPS16Q9Y3D3 137 aaKnown RBP16.89■□□□□ 0.29
COL18A1-207ENST00000473212 FAM87AP0C7U9 286 aa16.89■□□□□ 0.29
COL18A1-207ENST00000473212 CA7P43166 264 aa16.89■□□□□ 0.29
COL18A1-207ENST00000473212 PGLYRP4Q96LB8 373 aa16.89■□□□□ 0.29
COL18A1-207ENST00000473212 ASH1LQ9NR48 2969 aaKnown RBP16.88■□□□□ 0.29
COL18A1-207ENST00000473212 IGHV2-26A0A0B4J1V2 119 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 ARHGAP32A7KAX9 2087 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 IGLC7A0M8Q6 106 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 NDUFB3O43676 98 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 SFTPCP11686 197 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 UNQ5815/PRO19632Q6UWF5 114 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 ZNF596Q8TC21 504 aa16.88■□□□□ 0.29
COL18A1-207ENST00000473212 LYNX1G3V0Z9 82 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 P01737 135 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 LYNX1P0DP58 116 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 ETFRF1Q6IPR1 90 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 FAM71F2Q6NXP2 309 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 LINC00311Q8N616 119 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 PRSS33Q8NF86 280 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 IGFBPL1Q8WX77 278 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 PRSS22Q9GZN4 317 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 A8MWL6 223 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 CRYGCP07315 174 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 DLX6P56179 175 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 TMEM70Q9BUB7 260 aa16.87■□□□□ 0.29
COL18A1-207ENST00000473212 TNFRSF13BO14836 293 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-207ENST00000473212 TOMM40O96008 361 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 RELQ04864 619 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-207ENST00000473212 LRRC10Q5BKY1 277 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 FAM120AOSQ5T036 256 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 SMIM12Q96EX1 92 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 TRGV9Q99603 122 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 Q9H3A6 140 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 C20orf202A1L168 122 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 LTAP01374 205 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 GP9P14770 177 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 ZNF137PP52743 207 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 PRR30Q53SZ7 412 aaPredicted RBP16.86■□□□□ 0.29
COL18A1-207ENST00000473212 C5orf17Q8NAS9 161 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 ORAOV1Q8WV07 137 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 FMC1Q96HJ9 113 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 ZNF835Q9Y2P0 537 aa16.86■□□□□ 0.29
COL18A1-207ENST00000473212 C19orf71A6NCJ1 209 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 LINC00173Q6ZV60 143 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 OR4F17Q8NGA8 305 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 TP73-AS1Q9UF72 201 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 TOX4O94842 621 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 TCRAP04437 139 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 IGF2-ASQ6U949 168 aa16.85■□□□□ 0.29
COL18A1-207ENST00000473212 SPTA1P02549 2419 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 CCL25O15444 150 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 C22orf15Q8WYQ4 148 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 DAZAP1Q96EP5 407 aaKnown RBP16.84■□□□□ 0.29
COL18A1-207ENST00000473212 ABHD17AQ96GS6 310 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 IGHV1-8P0DP01 117 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 MC5RP33032 325 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 C8orf31Q8N9H6 132 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 RNASE6Q93091 150 aaKnown RBP16.84■□□□□ 0.29
COL18A1-207ENST00000473212 ASCL2Q99929 193 aa16.84■□□□□ 0.29
COL18A1-207ENST00000473212 TRAV8-1A0A0A6YYK1 113 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 IGHV1-24A0A0C4DH33 117 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 OR4C46A6NHA9 309 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 PTTG1IPP53801 180 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 TMEM116Q8NCL8 245 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 RPL27AP46776 148 aaKnown RBP16.83■□□□□ 0.28
COL18A1-207ENST00000473212 LGALS7P47929 136 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 TMEM155Q4W5P6 130 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 CT83Q5H943 113 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 ZNF492Q9P255 531 aa16.83■□□□□ 0.28
COL18A1-207ENST00000473212 RBPMS2Q6ZRY4 209 aaKnown RBP16.82■□□□□ 0.28
COL18A1-207ENST00000473212 CBY1Q9Y3M2 126 aa16.82■□□□□ 0.28
COL18A1-207ENST00000473212 MUC6Q6W4X9 2439 aa16.82■□□□□ 0.28
COL18A1-207ENST00000473212 E7EQL1 145 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 PRRG2O14669 202 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 FAM162BQ5T6X4 162 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 MUC15Q8N387 334 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 C8orf46Q8TAG6 207 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 COX11Q9Y6N1 276 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 PVRIGQ6DKI7 326 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 CIARTQ8N365 385 aaPredicted RBP16.81■□□□□ 0.28
COL18A1-207ENST00000473212 DYNLRB1Q9NP97 96 aa16.81■□□□□ 0.28
COL18A1-207ENST00000473212 Q8NA96 180 aa16.8■□□□□ 0.28
COL18A1-207ENST00000473212 SOX21Q9Y651 276 aaPredicted RBP16.8■□□□□ 0.28
COL18A1-207ENST00000473212 SYS1-DBNDD2H3BUS1 97 aa16.8■□□□□ 0.28
COL18A1-207ENST00000473212 LEPROTL1O95214 131 aa16.8■□□□□ 0.28
COL18A1-207ENST00000473212 TEX45Q8NA69 505 aa16.8■□□□□ 0.28
COL18A1-207ENST00000473212 CHCHD1Q96BP2 118 aaKnown RBP16.8■□□□□ 0.28
COL18A1-207ENST00000473212 hDV102S1A0JD36 115 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 SHISA9B4DS77 424 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 CHEK1O14757 476 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 CRXO43186 299 aaPredicted RBP16.79■□□□□ 0.28
COL18A1-207ENST00000473212 ZNF138P52744 262 aa16.79■□□□□ 0.28
COL18A1-207ENST00000473212 LYZP61626 148 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms