RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SLC25A2Q9BXI2 301 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 OR51M1Q9H341 326 aa11.39□□□□□ -0.59
HIF3A-206ENST00000472815 BMPR1BO00238 502 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 IGLV1-40P01703 118 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 CLEC3BP05452 202 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 UBE2G2P60604 165 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 FAM74A3Q4VXF1 159 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 SLC25A39Q9BZJ4 359 aaPredicted RBP11.38□□□□□ -0.59
HIF3A-206ENST00000472815 MRPL27Q9P0M9 148 aaKnown RBP11.38□□□□□ -0.59
HIF3A-206ENST00000472815 TGOLN2O43493 480 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 CD81P60033 236 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 CLEC19AQ6UXS0 136 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 FAM167A-AS1Q96KT0 104 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 GNB4Q9HAV0 340 aa11.38□□□□□ -0.59
HIF3A-206ENST00000472815 F8P00451 2351 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 A0A1W2PRE2 83 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 FAM74A7A6NL05 159 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 IGHG4P01861 327 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 RAB9AP51151 201 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 CFHR3Q02985 330 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 Q6ZS46 218 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 CCDC140Q96MF4 163 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 RABAC1Q9UI14 185 aa11.37□□□□□ -0.59
HIF3A-206ENST00000472815 PUS1Q9Y606 427 aaKnown RBP eCLIP11.37□□□□□ -0.59
HIF3A-206ENST00000472815 TRAV5A0A0B4J249 113 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 OR10J4P0C629 311 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 GUCA2BQ16661 112 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 BPIFA4PQ86YQ2 179 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 TMEM190Q8WZ59 177 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 SHANK2-AS3Q9BTD1 123 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 CHRDL1Q9BU40 450 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 TMEM14CQ9P0S9 112 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 CDC42EP3Q9UKI2 254 aa11.36□□□□□ -0.59
HIF3A-206ENST00000472815 H3BRN7 92 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ADMP35318 185 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 RPL15P61313 204 aaKnown RBP11.35□□□□□ -0.59
HIF3A-206ENST00000472815 PNRC1Q12796 327 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-206ENST00000472815 MORN5Q5VZ52 161 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 TEX38Q6PEX7 206 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF503Q96F45 646 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 TCEAL7Q9BRU2 100 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF702PQ9H963 129 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 M0R036 132 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 SRD5A1P18405 259 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ARL3P36405 182 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ATP5G3P48201 142 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 FAM90A2PQ658T7 463 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 Q8N2B8 174 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF418Q8TF45 676 aaPredicted RBP11.35□□□□□ -0.59
HIF3A-206ENST00000472815 SMIM7Q9BQ49 75 aa11.35□□□□□ -0.59
HIF3A-206ENST00000472815 ZFHX3Q15911 3703 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.34□□□□□ -0.59
HIF3A-206ENST00000472815 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 CLDN34H7C241 214 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 LY6G6DO95868 133 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 ELANEP08246 267 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 PSMB8P28062 276 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 CLRN3Q8NCR9 226 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 RPUSD4Q96CM3 377 aaKnown RBP11.34□□□□□ -0.59
HIF3A-206ENST00000472815 TVP23CQ96ET8 276 aa11.34□□□□□ -0.59
HIF3A-206ENST00000472815 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
HIF3A-206ENST00000472815 ZNF98A6NK75 572 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 H3BQ15 152 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 NBEAP1P0C6P0 100 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 PYYP10082 97 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 GP9P14770 177 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 FOXE3Q13461 319 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-206ENST00000472815 RHEBQ15382 184 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 USF2Q15853 346 aaPredicted RBP11.33□□□□□ -0.6
HIF3A-206ENST00000472815 TMEM95Q3KNT9 176 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 FXYD5Q96DB9 178 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 SMR3AQ99954 134 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 MXRA5Q9NR99 2828 aa11.33□□□□□ -0.6
HIF3A-206ENST00000472815 HIVEP2P31629 2446 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 CRYBA1P05813 215 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
HIF3A-206ENST00000472815 RPL7P18124 248 aaKnown RBP11.32□□□□□ -0.6
HIF3A-206ENST00000472815 ZNF674Q2M3X9 581 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 ZNF343Q6P1L6 599 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 TOMM20LQ6UXN7 152 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 DUX5Q96PT3 197 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 JMJD8Q96S16 334 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 METTL26Q96S19 204 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 PARLQ9H300 379 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 NAT8Q9UHE5 227 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 B4DEV8 164 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 LEMD1Q68G75 181 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 ZNF329Q86UD4 541 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 OR4X2Q8NGF9 303 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 GPR82Q96P67 336 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 KLK15Q9H2R5 256 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 PRELID1Q9Y255 219 aa11.32□□□□□ -0.6
HIF3A-206ENST00000472815 SONP18583 2426 aaKnown RBP11.31□□□□□ -0.6
HIF3A-206ENST00000472815 NDUFA4O00483 81 aa11.31□□□□□ -0.6
HIF3A-206ENST00000472815 SUMO1P63165 101 aaKnown RBP11.31□□□□□ -0.6
HIF3A-206ENST00000472815 TMEM241Q24JQ0 296 aa11.31□□□□□ -0.6
HIF3A-206ENST00000472815 AWAT1Q58HT5 328 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms