RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 LINC01559Q495D7 138 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 PXDC1Q5TGL8 231 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 C10orf113Q5VZT2 155 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 REC114Q7Z4M0 266 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 BAP18Q8IXM2 172 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 TMEM190Q8WZ59 177 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 SLC25A22Q9H936 323 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 DNAJC4Q9NNZ3 241 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 DAZ1Q9NQZ3 744 aaKnown RBP8.06□□□□□ -1.12
UBE2F-220ENST00000472479 CYTL1Q9NRR1 136 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 TIMM9Q9Y5J7 89 aa8.06□□□□□ -1.12
UBE2F-220ENST00000472479 ELOA3CA0A087WX78 387 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-220ENST00000472479 WI2-2373I1.2A0A1W2PRP0 233 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 SEC14L6B5MCN3 397 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 K7EMT4 169 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 MBP02144 154 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 SERF2P84101 59 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 FHL3Q13643 280 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 LAMTOR1Q6IAA8 161 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 SPATA3Q8NHX4 192 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 PSMG3Q9BT73 122 aaPredicted RBP8.05□□□□□ -1.12
UBE2F-220ENST00000472479 SH3BGRL3Q9H299 93 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 ARV1Q9H2C2 271 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 RNF24Q9Y225 148 aa8.05□□□□□ -1.12
UBE2F-220ENST00000472479 COL6A5A8TX70 2615 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 IGHV7-4-1A0A0J9YVY3 117 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 C2orf70A6NJV1 201 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 FOLR2P14207 255 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 USF2Q15853 346 aaPredicted RBP8.04□□□□□ -1.12
UBE2F-220ENST00000472479 KRTAP21-3Q3LHN1 58 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 FAM78BQ5VT40 261 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 FAM122CQ6P4D5 195 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 LINC00305Q7Z4B0 112 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 OR8I2Q8N0Y5 310 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 LINC00482Q8N8I6 264 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 OR10G4Q8NGN3 311 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 OR10G9Q8NGN4 311 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 OR10G7Q8NGN6 311 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 ST8SIA2Q92186 375 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 MARC2Q969Z3 335 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 RNF2Q99496 336 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 MCRIP2Q9BUT9 160 aaKnown RBP8.04□□□□□ -1.12
UBE2F-220ENST00000472479 RHPN1-AS1Q9BWJ2 59 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 ZFAND3Q9H8U3 227 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 MRPL27Q9P0M9 148 aaKnown RBP8.04□□□□□ -1.12
UBE2F-220ENST00000472479 RFNGQ9Y644 331 aa8.04□□□□□ -1.12
UBE2F-220ENST00000472479 IGKV3-7A0A075B6H7 116 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 CBLN1P23435 193 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 RHOBP62745 196 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 C9orf66Q5T8R8 295 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 RBPMS2Q6ZRY4 209 aaKnown RBP8.03□□□□□ -1.12
UBE2F-220ENST00000472479 GATAD1Q8WUU5 269 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 TMED6Q8WW62 240 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 SMPXQ9UHP9 88 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 SELENOKQ9Y6D0 94 aa8.03□□□□□ -1.12
UBE2F-220ENST00000472479 ZNF785A8K8V0 405 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 APOHP02749 345 aaPredicted RBP8.02□□□□□ -1.13
UBE2F-220ENST00000472479 SEC11BP0C7V7 166 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 M6PRP20645 277 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 PLP1P60201 277 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 TMEM41BQ5BJD5 291 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 IQCF2Q8IXL9 164 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 LRRC20Q8TCA0 184 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 UHRF2Q96PU4 802 aa8.02□□□□□ -1.13
UBE2F-220ENST00000472479 SLC25A39Q9BZJ4 359 aaPredicted RBP8.02□□□□□ -1.13
UBE2F-220ENST00000472479 ACTR3CQ9C0K3 210 aaPredicted RBP8.02□□□□□ -1.13
UBE2F-220ENST00000472479 TMEM213A2RRL7 107 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 ZNF98A6NK75 572 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 A8MWP6 167 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 DNASE2O00115 360 aaPredicted RBP8.01□□□□□ -1.13
UBE2F-220ENST00000472479 CSN3P07498 182 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 SPP1P10451 314 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 ATF4P18848 351 aaPredicted RBP8.01□□□□□ -1.13
UBE2F-220ENST00000472479 CRYBB3P26998 211 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 TAS2R45P59539 299 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 RAB2AP61019 212 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 PAFAH1B2P68402 229 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 GCSAMLQ5JQS6 135 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 LEMD1Q68G75 181 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 PATE2Q6UY27 113 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 TCF24Q7RTU0 167 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 STOML3Q8TAV4 291 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 TMEM37Q8WXS4 190 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 SCRT1Q9BWW7 348 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 GPR61Q9BZJ8 451 aa8.01□□□□□ -1.13
UBE2F-220ENST00000472479 TRAV5A0A0B4J249 113 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 HELTA6NFD8 242 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 UMAD1C9J7I0 102 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 CHEK1O14757 476 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 HMGB3O15347 200 aaKnown RBP8□□□□□ -1.13
UBE2F-220ENST00000472479 IGLL1P15814 213 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 RPL7P18124 248 aaKnown RBP8□□□□□ -1.13
UBE2F-220ENST00000472479 EDN2P20800 178 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 GALR1P47211 349 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 TFPI2P48307 235 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 CDC34P49427 236 aaPredicted RBP8□□□□□ -1.13
UBE2F-220ENST00000472479 GUCA2BQ16661 112 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 PRR31Q5SQ13 230 aa8□□□□□ -1.13
UBE2F-220ENST00000472479 LCE2AQ5TA79 106 aaPredicted RBP8□□□□□ -1.13
UBE2F-220ENST00000472479 MIR17HGQ75NE6 70 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms