RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
SORT1-203ENST00000471996 C3orf85A0A1B0GTC6 90 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 M0R2Z0 102 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 PI3P19957 117 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 OR11H7Q8NGC8 314 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 RXFP4Q8TDU9 374 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 GPX8Q8TED1 209 aa13.1□□□□□ -0.31
SORT1-203ENST00000471996 HMCN2Q8NDA2 5059 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 TRAV26-1A0A087WT03 109 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 FAM229AH3BQW9 127 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 RCVRNP35243 200 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
SORT1-203ENST00000471996 ERVFC1-1P60608 527 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 RNASE11Q8TAA1 199 aaKnown RBP13.09□□□□□ -0.31
SORT1-203ENST00000471996 C16orf92Q96LL3 132 aa13.09□□□□□ -0.31
SORT1-203ENST00000471996 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.09□□□□□ -0.31
SORT1-203ENST00000471996 IFNA5P01569 189 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 M6PRP20645 277 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 CNN1P51911 297 aaKnown RBP13.08□□□□□ -0.32
SORT1-203ENST00000471996 OR5I1Q13606 314 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 ICAM4Q14773 271 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 SP6Q3SY56 376 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 GPR141Q7Z602 305 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 OR8I2Q8N0Y5 310 aa13.08□□□□□ -0.32
SORT1-203ENST00000471996 TIMM8BQ9Y5J9 83 aaPredicted RBP13.08□□□□□ -0.32
SORT1-203ENST00000471996 DUSP14O95147 198 aaKnown RBP13.07□□□□□ -0.32
SORT1-203ENST00000471996 UCP1P25874 307 aa13.07□□□□□ -0.32
SORT1-203ENST00000471996 MEOX2P50222 304 aa13.07□□□□□ -0.32
SORT1-203ENST00000471996 Q6ZSN1 163 aa13.07□□□□□ -0.32
SORT1-203ENST00000471996 FAM219AQ8IW50 185 aa13.07□□□□□ -0.32
SORT1-203ENST00000471996 SAMD12Q8N8I0 201 aa13.07□□□□□ -0.32
SORT1-203ENST00000471996 A0A0J9YY99 117 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 CEBPZOSA8MTT3 80 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 ZNF90Q03938 601 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 KLF9Q13886 244 aaPredicted RBP13.06□□□□□ -0.32
SORT1-203ENST00000471996 NOXA1Q86UR1 476 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 C16orf74Q96GX8 76 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 LINC01587Q99440 93 aa13.06□□□□□ -0.32
SORT1-203ENST00000471996 TRAV12-2A0A075B6T6 113 aa13.05□□□□□ -0.32
SORT1-203ENST00000471996 TAS2R60P59551 318 aa13.05□□□□□ -0.32
SORT1-203ENST00000471996 LYZP61626 148 aa13.05□□□□□ -0.32
SORT1-203ENST00000471996 LSM3P62310 102 aaKnown RBP13.05□□□□□ -0.32
SORT1-203ENST00000471996 RNASE12Q5GAN4 147 aaKnown RBP13.05□□□□□ -0.32
SORT1-203ENST00000471996 LHFPL1Q86WI0 220 aa13.05□□□□□ -0.32
SORT1-203ENST00000471996 OR10J6PQ8NGY7 276 aa13.05□□□□□ -0.32
SORT1-203ENST00000471996 NOP10Q9NPE3 64 aaKnown RBP13.05□□□□□ -0.32
SORT1-203ENST00000471996 ZFP92A6NM28 416 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 ZNF701M0R085 212 aaPredicted RBP13.04□□□□□ -0.32
SORT1-203ENST00000471996 TGFBR1P36897 503 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 NMSQ5H8A3 153 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 PPP1R14BQ96C90 147 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 FUNDC2Q9BWH2 189 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 COPZ2Q9P299 210 aa13.04□□□□□ -0.32
SORT1-203ENST00000471996 IGKV1D-37A0A075B6S9 117 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 H3BNG1 76 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 HTN1P15515 57 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 GALR1P47211 349 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 TMEM256Q8N2U0 113 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 CACNG5Q9UF02 275 aa13.03□□□□□ -0.32
SORT1-203ENST00000471996 SNRPGP15A8MWD9 76 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 BOLA2-SMG1P6H3BVE0 249 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 B3GALNT1O75752 331 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 CDS2O95674 445 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 HOXA5P20719 270 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 ZNF493Q6ZR52 646 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 TMEM144Q7Z5S9 345 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 ARRDC1Q8N5I2 433 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 CCDC71LQ8N9Z2 235 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 RSG1Q9BU20 258 aa13.02□□□□□ -0.33
SORT1-203ENST00000471996 SMIM31A0A1B0GVY4 71 aa13.01□□□□□ -0.33
SORT1-203ENST00000471996 APOA1P02647 267 aa13.01□□□□□ -0.33
SORT1-203ENST00000471996 FABP1P07148 127 aa13.01□□□□□ -0.33
SORT1-203ENST00000471996 LINC00612Q8N6U2 182 aa13.01□□□□□ -0.33
SORT1-203ENST00000471996 RNASE8Q8TDE3 154 aaKnown RBP13.01□□□□□ -0.33
SORT1-203ENST00000471996 SLC25A39Q9BZJ4 359 aaPredicted RBP13.01□□□□□ -0.33
SORT1-203ENST00000471996 SLC25A32Q9H2D1 315 aa13.01□□□□□ -0.33
SORT1-203ENST00000471996 A0A087WTM6 91 aa13□□□□□ -0.33
SORT1-203ENST00000471996 ADAP1O75689 374 aa13□□□□□ -0.33
SORT1-203ENST00000471996 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
SORT1-203ENST00000471996 ZNF182P17025 639 aaPredicted RBP13□□□□□ -0.33
SORT1-203ENST00000471996 OR2F1Q13607 317 aa13□□□□□ -0.33
SORT1-203ENST00000471996 GAMTQ14353 236 aa13□□□□□ -0.33
SORT1-203ENST00000471996 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13□□□□□ -0.33
SORT1-203ENST00000471996 SNX29P2Q8IUI4 249 aa13□□□□□ -0.33
SORT1-203ENST00000471996 LHFPL5Q8TAF8 219 aa13□□□□□ -0.33
SORT1-203ENST00000471996 ZFAND1Q8TCF1 268 aa13□□□□□ -0.33
SORT1-203ENST00000471996 TMEM222Q9H0R3 208 aa13□□□□□ -0.33
SORT1-203ENST00000471996 U3KQ87 197 aa13□□□□□ -0.33
SORT1-203ENST00000471996 DNAH8Q96JB1 4490 aa13□□□□□ -0.33
SORT1-203ENST00000471996 KRTAP29-1A8MX34 341 aaPredicted RBP12.99□□□□□ -0.33
SORT1-203ENST00000471996 SIVA1O15304 175 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 GCSHP23434 173 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 VBP1P61758 197 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 NCS1P62166 190 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 HAMPP81172 84 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 SERTAD4-AS1Q5TG53 156 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 IGFL4Q6B9Z1 124 aa12.99□□□□□ -0.33
SORT1-203ENST00000471996 GLYATL2Q8WU03 294 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms