RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 FAM25CB3EWG5 89 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 FAM25GB3EWG6 89 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 GABARAPH6UMI1 98 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 ISLRO14498 428 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 GABARAPO95166 117 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 ATP6V1G2O95670 118 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 CDS2O95674 445 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 CD3DP04234 171 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 S100A7P31151 101 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 MEOX2P50222 304 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 RORCP51449 518 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 TAS2R19P59542 299 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 SUPT4H1P63272 117 aaKnown RBP6.48□□□□□ -1.37
CPSF4-211ENST00000471455 PSG9Q00887 426 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 MEF2DQ14814 521 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 SURF2Q15527 256 aaPredicted RBP6.48□□□□□ -1.37
CPSF4-211ENST00000471455 SCGB2B2Q4G0G5 96 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 C1orf194Q5T5A4 169 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 TMEM88Q6PEY1 159 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 PPP1R14BQ96C90 147 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 YIPF6Q96EC8 236 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 PBDC1Q9BVG4 233 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 KRTAP4-2Q9BYR5 136 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 MAGT1Q9H0U3 335 aa6.48□□□□□ -1.37
CPSF4-211ENST00000471455 YTHDF2Q9Y5A9 579 aaKnown RBP6.48□□□□□ -1.37
CPSF4-211ENST00000471455 A0A087WXM4 84 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 PIGBOS1A0A0B4J2F0 54 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 ZFP92A6NM28 416 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 HPGDSO60760 199 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 RAB3DO95716 219 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 OR5AC1P0C628 307 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 PSG1P11464 419 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 ELK1P19419 428 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 PAX9P55771 341 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 ATP5IP56385 69 aaPredicted RBP6.47□□□□□ -1.37
CPSF4-211ENST00000471455 FXYD7P58549 80 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 KLF9Q13886 244 aaPredicted RBP6.47□□□□□ -1.37
CPSF4-211ENST00000471455 ZNF79Q15937 498 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 RNASE12Q5GAN4 147 aaKnown RBP6.47□□□□□ -1.37
CPSF4-211ENST00000471455 NMSQ5H8A3 153 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 TMEM229BQ8NBD8 167 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 SLC35E1Q96K37 410 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 NAA60Q9H7X0 242 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 RPRMQ9NS64 109 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 MTFP1Q9UDX5 166 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 U3KQ87 197 aa6.47□□□□□ -1.37
CPSF4-211ENST00000471455 LYRM9A8MSI8 78 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 DISC1C4P0D8 188 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 SULT1A3P0DMM9 295 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 SULT1A4P0DMN0 295 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 B2MP61769 119 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 SSBP1Q04837 148 aaKnown RBP6.46□□□□□ -1.38
CPSF4-211ENST00000471455 GDF5OSQ5U4N7 250 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 GPR107Q5VW38 600 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 TMEM268Q5VZI3 342 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 STEAP1BQ6NZ63 245 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 OR8I2Q8N0Y5 310 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 LGI3Q8N145 548 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 C6orf223Q8N319 242 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 MAPKAPK5-AS1Q8N8E1 139 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 ZNF709Q8N972 641 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 OR52I2Q8NH67 350 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 MARCH1Q8TCQ1 289 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 IL22RA2Q969J5 263 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 KRTAP4-11Q9BYQ6 195 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 EXTL2Q9UBQ6 330 aa6.46□□□□□ -1.38
CPSF4-211ENST00000471455 PKD1P98161 4303 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 A0A0J9YX75 114 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 NBDYA0A0U1RRE5 68 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 SNRPGP15A8MWD9 76 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 CFDP00746 253 aaPredicted RBP6.45□□□□□ -1.38
CPSF4-211ENST00000471455 INSP01308 110 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 GPX4P36969 197 aaPredicted RBP6.45□□□□□ -1.38
CPSF4-211ENST00000471455 GALR1P47211 349 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 CCL18P55774 89 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 LYZP61626 148 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 MRPS10P82664 201 aaKnown RBP6.45□□□□□ -1.38
CPSF4-211ENST00000471455 FAM78BQ5VT40 261 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 SELENOHQ8IZQ5 122 aaKnown RBP6.45□□□□□ -1.38
CPSF4-211ENST00000471455 GLYATL2Q8WU03 294 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 GPR146Q96CH1 333 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 C16orf92Q96LL3 132 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 IGF2BP2-AS1Q96M15 143 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 WDR12Q9GZL7 423 aaKnown RBP6.45□□□□□ -1.38
CPSF4-211ENST00000471455 SLC35B3Q9H1N7 401 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 DOK5Q9P104 306 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 KCNIP3Q9Y2W7 256 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 NACAE9PAV3 2078 aa6.45□□□□□ -1.38
CPSF4-211ENST00000471455 CRYM-AS1A6NIL9 109 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 SOCS3O14543 225 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
CPSF4-211ENST00000471455 CCR6P51684 374 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 NCS1P62166 190 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 SRPXP78539 464 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 C1orf158Q8N1D5 194 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 OR4D10Q8NGI6 311 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 OR4C16Q8NGL9 310 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 LHFPL5Q8TAF8 219 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 DTD1Q8TEA8 209 aa6.44□□□□□ -1.38
CPSF4-211ENST00000471455 TMEM170AQ8WVE7 144 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms