RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 LINC00305Q7Z4B0 112 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 FAM167A-AS1Q96KT0 104 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 UHRF2Q96PU4 802 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 SMIM7Q9BQ49 75 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 FBXL7Q9UJT9 491 aa13.66□□□□□ -0.22
HSPG2-208ENST00000471322 FAM74A7A6NL05 159 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 OR2J3O76001 311 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 NDUFB8O95169 186 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 TOMM40O96008 361 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 AMY1AP04745 511 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 OR5AU1Q8NGC0 362 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 SLC25A2Q9BXI2 301 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 GAR1Q9NY12 217 aaKnown RBP13.65□□□□□ -0.22
HSPG2-208ENST00000471322 NAT8Q9UHE5 227 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 HIGD1AQ9Y241 93 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 ANK2Q01484 3957 aa13.65□□□□□ -0.22
HSPG2-208ENST00000471322 TMEM241Q24JQ0 296 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 Q56UQ5 140 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 ZNF503Q96F45 646 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 PAXXQ9BUH6 204 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 C20orf24Q9BUV8 137 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 VPREB3Q9UKI3 123 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 A0A087WWC5 75 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 TRBV9A0A0B4J1U6 114 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 A0A1W2PRE2 83 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 IGF1P05019 195 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 ATP5G3P48201 142 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 TMEM88Q6PEY1 159 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 TMEM86BQ8N661 226 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 NECAP1Q8NC96 275 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 Q8WTZ3 238 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 RPUSD4Q96CM3 377 aaKnown RBP13.64□□□□□ -0.23
HSPG2-208ENST00000471322 OR51M1Q9H341 326 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 TUBA4BQ9H853 241 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 SDF2L1Q9HCN8 221 aa13.64□□□□□ -0.23
HSPG2-208ENST00000471322 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
HSPG2-208ENST00000471322 TRAV5A0A0B4J249 113 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 TRAV41A0A0B4J266 112 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 NUPL2O15504 423 aaKnown RBP13.63□□□□□ -0.23
HSPG2-208ENST00000471322 CRYBA1P05813 215 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 LYZP61626 148 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 UBE2L3P68036 154 aaKnown RBP13.63□□□□□ -0.23
HSPG2-208ENST00000471322 ZNF674Q2M3X9 581 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 OR5R1Q8NH85 324 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 PARLQ9H300 379 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 PRELID1Q9Y255 219 aa13.63□□□□□ -0.23
HSPG2-208ENST00000471322 IGHG2P01859 326 aa13.62□□□□□ -0.23
HSPG2-208ENST00000471322 RHOGP84095 191 aa13.62□□□□□ -0.23
HSPG2-208ENST00000471322 CBLN2Q8IUK8 224 aa13.62□□□□□ -0.23
HSPG2-208ENST00000471322 ATP6V0BQ99437 205 aa13.62□□□□□ -0.23
HSPG2-208ENST00000471322 MRPL27Q9P0M9 148 aaKnown RBP13.62□□□□□ -0.23
HSPG2-208ENST00000471322 SH2D7A6NKC9 451 aaPredicted RBP13.61□□□□□ -0.23
HSPG2-208ENST00000471322 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 G3V318 75 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 OR2C1O95371 312 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 BRI3O95415 125 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 S100A7P31151 101 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 C19orf54Q5BKX5 351 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 C9orf152Q5JTZ5 239 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 MORN5Q5VZ52 161 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 RNF24Q9Y225 148 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 WI2-2373I1.2A0A1W2PRP0 233 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 NDUFB4O95168 129 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 OR10J4P0C629 311 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 C15orf32Q32M92 178 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 ZNF491Q8N8L2 437 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 C11orf52Q96A22 123 aa13.61□□□□□ -0.23
HSPG2-208ENST00000471322 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 F8W735 103 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-208ENST00000471322 H3BUA1 57 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 TSPAN4O14817 238 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 NPPCP23582 126 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 KIAA0141Q14154 515 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-208ENST00000471322 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 ZNF502Q8TBZ5 544 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 EEF1AKMT3Q96AZ1 226 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 RNF125Q96EQ8 232 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 TCEAL7Q9BRU2 100 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 SLC25A39Q9BZJ4 359 aaPredicted RBP13.6□□□□□ -0.23
HSPG2-208ENST00000471322 TMEM14CQ9P0S9 112 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 ZNF580Q9UK33 172 aa13.6□□□□□ -0.23
HSPG2-208ENST00000471322 TRBV7-1A0A0A6YYK4 115 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 TMEM89A2RUT3 159 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 AP4M1O00189 453 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 AKR1C3P42330 323 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 C15orf54Q8N8G6 183 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 TMEM190Q8WZ59 177 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 FXYD5Q96DB9 178 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 TMA7Q9Y2S6 64 aaKnown RBP13.59□□□□□ -0.23
HSPG2-208ENST00000471322 S4R3C0 116 aa13.59□□□□□ -0.23
HSPG2-208ENST00000471322 CXorf65A6NEN9 183 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 IL4P05112 153 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 CTSGP08311 255 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 SHANK2-AS3Q9BTD1 123 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 CTDSP1Q9GZU7 261 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 TMEM242Q9NWH2 141 aa13.58□□□□□ -0.24
HSPG2-208ENST00000471322 SCO2A0A1W2PP80 73 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 OR2T8A6NH00 312 aa13.57□□□□□ -0.24
HSPG2-208ENST00000471322 PYYP10082 97 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms