RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 MYO18AQ92614 2054 aaKnown RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SP9P0CG40 484 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 RNASE2P10153 161 aaKnown RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 TIMP3P35625 211 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 LIMS1P48059 325 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 BRD3OSQ6XYD6 125 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 ZCCHC24Q8N2G6 241 aaKnown RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 C15orf53Q8NAA6 179 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 CARD19Q96LW7 228 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 RTBDNQ9BSG5 229 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 URB1O60287 2271 aaKnown RBP5.68□□□□□ -1.5
BRCA1-210ENST00000471181 SBF1O95248 1867 aa5.68□□□□□ -1.5
BRCA1-210ENST00000471181 IFITM3Q01628 133 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 RIPPLY2Q5TAB7 128 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 ZC2HC1BQ5TFG8 222 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 TRPT1Q86TN4 253 aaKnown RBP5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SPTSSBQ8NFR3 76 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 FAM110DQ8TAY7 271 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-210ENST00000471181 XCL2Q9UBD3 114 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 TP53TG1Q9Y2A0 90 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 PIN1P1O15428 100 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 DLEU1O43261 78 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BKO60814 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 IGKV1-5P01602 117 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 C1QCP02747 245 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BJP06899 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 IGHV1-2P23083 117 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BOP23527 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BBP33778 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BDP58876 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BCP62807 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST2H2BEQ16778 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SLC25A48Q6ZT89 311 aaKnown RBP5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SLC22A18ASQ8N1D0 253 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 ANKRD29Q8N6D5 301 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BHQ93079 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BNQ99877 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BMQ99879 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SPATA25Q9BR10 227 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 VSIRQ9H7M9 311 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 RNF114Q9Y508 228 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 ZNF329Q86UD4 541 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 TMEM243Q9BU79 118 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SPANXA1Q9NS26 97 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 SDK1Q7Z5N4 2213 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 IGKV2D-24A0A075B6R9 120 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 UBE2CO00762 179 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 RFPL3SP0C7P2 107 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 PSG7Q13046 419 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 TEX38Q6PEX7 206 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 C18orf12Q96KH6 178 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 HIST1H2BLQ99880 126 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 PRDM6Q9NQX0 595 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 TMEM242Q9NWH2 141 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 KLK9Q9UKQ9 250 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 A0A1W2PR77 199 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 ACYP1P07311 99 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 AZU1P20160 251 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 UBE2V1Q13404 147 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 BOD1L2Q8IYS8 172 aa5.67□□□□□ -1.5
BRCA1-210ENST00000471181 RNASE6Q93091 150 aaKnown RBP5.66□□□□□ -1.5
BRCA1-210ENST00000471181 LIME1Q9H400 295 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 TIAM2Q8IVF5 1701 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 A0A0A6YYD4 124 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 TGFBR3LH3BV60 316 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 IL18BPO95998 194 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 IGHMP01871 453 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 FGF6P10767 208 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 SLC25A16P16260 332 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 MP68P56378 58 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 LY6DQ14210 128 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 MORN2Q502X0 79 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 LILRA6Q6PI73 481 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 STPG4Q8N801 248 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 NDUFB1O75438 58 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 DEFB131AP59861 70 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 IFITM2Q01629 132 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 ATRAIDQ6UW56 229 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 H3BUX3 64 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 CHCHD2P9Q5T1J5 151 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-210ENST00000471181 PRSS57Q6UWY2 283 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 GREB1LQ9C091 1923 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-210ENST00000471181 RHODO00212 210 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 CD160O95971 181 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 IGFBP3P17936 291 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-210ENST00000471181 FAM90A1Q86YD7 464 aa5.66□□□□□ -1.5
BRCA1-210ENST00000471181 FAM231BA6NCW3 169 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 TEX22C9J3V5 150 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 E9PQ18 207 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 SYS1-DBNDD2H3BUS1 97 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 GREM1O60565 184 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 C4orf48Q5BLP8 95 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 AMN1Q8IY45 258 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 PPDPFLQ8WWR9 84 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 Q9HAA7 133 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 TRBV7-1A0A0A6YYK4 115 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 LOC105371267A0A1B0GV96 52 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 J3QW42 95 aa5.65□□□□□ -1.5
BRCA1-210ENST00000471181 AMBPP02760 352 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms