RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 TRAV30A0A087WSZ9 112 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 ELOA3CA0A087WX78 387 aaPredicted RBP6.42□□□□□ -1.38
GTF3A-206ENST00000470606 TRBV7-1A0A0A6YYK4 115 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 FAM223BA6NKX1 122 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 H3BUA1 57 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 SCO1O75880 301 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 RPLP1P05386 114 aaKnown RBP6.42□□□□□ -1.38
GTF3A-206ENST00000470606 C8orf88P0DMB2 117 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 CD99P14209 185 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 ATP5G3P48201 142 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 SRSF2Q01130 221 aaKnown RBP6.42□□□□□ -1.38
GTF3A-206ENST00000470606 KHDC3LQ587J8 217 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 TCTEX1D4Q5JR98 221 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 ZNF343Q6P1L6 599 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 TOMM20LQ6UXN7 152 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 FAM223AQ8IWN6 122 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 TEX29Q8N6K0 151 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 OR5AU1Q8NGC0 362 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 SORL1Q92673 2214 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 EEF1AKMT3Q96AZ1 226 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 FXYD5Q96DB9 178 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 PFDN5Q99471 154 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 C19orf24Q9BVV8 132 aa6.42□□□□□ -1.38
GTF3A-206ENST00000470606 SLC25A39Q9BZJ4 359 aaPredicted RBP6.42□□□□□ -1.38
GTF3A-206ENST00000470606 TECRQ9NZ01 308 aaKnown RBP6.42□□□□□ -1.38
GTF3A-206ENST00000470606 KRBOX1C9JBD0 128 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 CLDN34H7C241 214 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 TGOLN2O43493 480 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 OR7C2O60412 319 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 GP9P14770 177 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 SRD5A1P18405 259 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 PSMB3P49720 205 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 PEA15Q15121 130 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 FAM90A2PQ658T7 463 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 UNQ9165/PRO28630Q6UXU0 137 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 OR1L4Q8NGR5 311 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 MYOZ3Q8TDC0 251 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 C17orf77Q96MU5 243 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 OR5B12Q96R08 314 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 MRPL32Q9BYC8 188 aaKnown RBP6.41□□□□□ -1.38
GTF3A-206ENST00000470606 SLC35B3Q9H1N7 401 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 VAX2Q9UIW0 290 aa6.41□□□□□ -1.38
GTF3A-206ENST00000470606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 FAM74A7A6NL05 159 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 GGTLC3B5MD39 225 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 H3BQ15 152 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 H3BRN7 92 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 H3BTX0 84 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 BMPR1BO00238 502 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 NUPL2O15504 423 aaKnown RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 APOC3P02656 99 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 HNF1AP20823 631 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 HILS1P60008 231 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 MEF2BQ02080 365 aaPredicted RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 RBMS3Q6XE24 437 aaKnown RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 PQLC2Q6ZP29 291 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 C18orf65Q6ZTR6 163 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 OR4X2Q8NGF9 303 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 WIPF2Q8TF74 440 aaPredicted RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 USMG5Q96IX5 58 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 SHANK2-AS3Q9BTD1 123 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 SEC11CQ9BY50 192 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 HIGD1AQ9Y241 93 aa6.4□□□□□ -1.38
GTF3A-206ENST00000470606 CARHSP1Q9Y2V2 147 aaKnown RBP6.4□□□□□ -1.38
GTF3A-206ENST00000470606 F8W036 122 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 TSPAN9O75954 239 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 APOHP02749 345 aaPredicted RBP6.4□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF600Q6ZNG1 722 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 CCDC28AQ8IWP9 274 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 RNF152Q8N8N0 203 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 GNB4Q9HAV0 340 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 CDC42EP3Q9UKI2 254 aa6.4□□□□□ -1.39
GTF3A-206ENST00000470606 IGHV3OR16-13A0A075B7E8 117 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 IGHV3-74A0A0B4J1X5 117 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF98A6NK75 572 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 C11orf94C9JXX5 98 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF207O43670 478 aaKnown RBP6.39□□□□□ -1.39
GTF3A-206ENST00000470606 RNASE1P07998 156 aaKnown RBP6.39□□□□□ -1.39
GTF3A-206ENST00000470606 FOSL1P15407 271 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 EDN2P20800 178 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 ARL3P36405 182 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 MYCNOSP40205 109 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 RPL15P61313 204 aaKnown RBP6.39□□□□□ -1.39
GTF3A-206ENST00000470606 UBE2L3P68036 154 aaKnown RBP6.39□□□□□ -1.39
GTF3A-206ENST00000470606 OR4F5Q8NH21 305 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 Q8WTZ3 238 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 OR4F4Q96R69 305 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 RNF2Q99496 336 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 PAXXQ9BUH6 204 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 DERL1Q9BUN8 251 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 OR51M1Q9H341 326 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 SMDT1Q9H4I9 107 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 MANBALQ9NQG1 85 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 ZNF586Q9NXT0 402 aa6.39□□□□□ -1.39
GTF3A-206ENST00000470606 NDUFB4O95168 129 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 IGLC2P0DOY2 106 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 PRB4P10163 310 aaPredicted RBP6.38□□□□□ -1.39
GTF3A-206ENST00000470606 CEBPGP53567 150 aa6.38□□□□□ -1.39
GTF3A-206ENST00000470606 TAS2R45P59539 299 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms