RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 IGF2BP2-AS1Q96M15 143 aa6.21□□□□□ -1.42
XRN1-208ENST00000470537 C3orf85A0A1B0GTC6 90 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 CBY3A6NI87 242 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 SNRPGP15A8MWD9 76 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 ADAP1O75689 374 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 IGKV1-5P01602 117 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 DEFB130BP0DP73 79 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 DEFB130AP0DP74 79 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 ATP5IP56385 69 aaPredicted RBP6.2□□□□□ -1.42
XRN1-208ENST00000470537 PIGPP57054 158 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 USF2Q15853 346 aaPredicted RBP6.2□□□□□ -1.42
XRN1-208ENST00000470537 IZUMO4Q1ZYL8 232 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 GDF5OSQ5U4N7 250 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 FAM78BQ5VT40 261 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 GPR141Q7Z602 305 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 SPARTQ8N0X7 666 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 C1orf158Q8N1D5 194 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 OR4C16Q8NGL9 310 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 ZFAND1Q8TCF1 268 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 NPIPB3Q92617 1050 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 FRZBQ92765 325 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 RNF125Q96EQ8 232 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 SLC35B3Q9H1N7 401 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 MRPL36Q9P0J6 103 aaKnown RBP6.2□□□□□ -1.42
XRN1-208ENST00000470537 COPZ2Q9P299 210 aa6.2□□□□□ -1.42
XRN1-208ENST00000470537 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 GABARAPH6UMI1 98 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 DUSP14O95147 198 aaKnown RBP6.19□□□□□ -1.42
XRN1-208ENST00000470537 GABARAPO95166 117 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 CLEC2LP0C7M8 214 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 P0C879 139 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 PSG1P11464 419 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 SUPT4H1P63272 117 aaKnown RBP6.19□□□□□ -1.42
XRN1-208ENST00000470537 KLF9Q13886 244 aaPredicted RBP6.19□□□□□ -1.42
XRN1-208ENST00000470537 SSX7Q7RTT5 188 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 OR8I2Q8N0Y5 310 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 ARRDC1Q8N5I2 433 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 SAMD12Q8N8I0 201 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 OR10J6PQ8NGY7 276 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 GPX8Q8TED1 209 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 PPP1R14BQ96C90 147 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 ACY3Q96HD9 319 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 PBDC1Q9BVG4 233 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 DOK5Q9P104 306 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 RAB26Q9ULW5 256 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 LINC00588Q9Y4M8 146 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 U3KQ87 197 aa6.19□□□□□ -1.42
XRN1-208ENST00000470537 A0A0J9YX75 114 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 ZFP92A6NM28 416 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 CEBPZOSA8MTT3 80 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 CFDP00746 253 aaPredicted RBP6.18□□□□□ -1.42
XRN1-208ENST00000470537 INSP01308 110 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 TBPP20226 339 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 GALR1P47211 349 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 AARDQ4LEZ3 155 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 RNASE10Q5GAN6 216 aaKnown RBP6.18□□□□□ -1.42
XRN1-208ENST00000470537 TMEM256Q8N2U0 113 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 ZNF503Q96F45 646 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 TP53RKQ96S44 253 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 Q9H3A6 140 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 Q9H521 79 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 HERC1Q15751 4861 aa6.18□□□□□ -1.42
XRN1-208ENST00000470537 TNFAIP8O95379 198 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 IFNA5P01569 189 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 APOA1P02647 267 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 ZNF182P17025 639 aaPredicted RBP6.17□□□□□ -1.42
XRN1-208ENST00000470537 UCP1P25874 307 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 IZUMO2Q6UXV1 221 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 ZNF493Q6ZR52 646 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 NRG4Q8WWG1 115 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 GNPNAT1Q96EK6 184 aaPredicted RBP6.17□□□□□ -1.42
XRN1-208ENST00000470537 WDR12Q9GZL7 423 aaKnown RBP6.17□□□□□ -1.42
XRN1-208ENST00000470537 PPP1R14DQ9NXH3 145 aa6.17□□□□□ -1.42
XRN1-208ENST00000470537 TIMM8BQ9Y5J9 83 aaPredicted RBP6.17□□□□□ -1.42
XRN1-208ENST00000470537 PIGBOS1A0A0B4J2F0 54 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 ZNF705GA8MUZ8 300 aaPredicted RBP6.16□□□□□ -1.42
XRN1-208ENST00000470537 CDS2O95674 445 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 GPX4P36969 197 aaPredicted RBP6.16□□□□□ -1.42
XRN1-208ENST00000470537 SP6Q3SY56 376 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 GGNBP1Q5YKI7 109 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 LYPD1Q8N2G4 141 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 OR4D5Q8NGN0 318 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 TERB2Q8NHR7 220 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 C15orf40Q8WUR7 153 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 RBPMSQ93062 196 aaKnown RBP6.16□□□□□ -1.42
XRN1-208ENST00000470537 C16orf74Q96GX8 76 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 GPR82Q96P67 336 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 LINC01587Q99440 93 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 UPK3BQ9BT76 320 aa6.16□□□□□ -1.42
XRN1-208ENST00000470537 SRRM2Q9UQ35 2752 aaKnown RBP6.16□□□□□ -1.42
XRN1-208ENST00000470537 TEX13DA0A0J9YY54 714 aaPredicted RBP6.15□□□□□ -1.42
XRN1-208ENST00000470537 A8MTW9 85 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 H3BNG1 76 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 SOCS3O14543 225 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 M6PRP20645 277 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 TAS2R60P59551 318 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 OR5I1Q13606 314 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 GAMTQ14353 236 aa6.15□□□□□ -1.42
XRN1-208ENST00000470537 RNASE12Q5GAN4 147 aaKnown RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms