RNA–Protein interactions for RNA: ENST00000470339.1

COL4A5-203, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 782 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-203ENST00000470339 SPATA31B1PQ5VZV4 182 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 UQCC3Q6UW78 93 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 TOMM20LQ6UXN7 152 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 MIR17HGQ75NE6 70 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 FAM210AQ96ND0 272 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 PBDC1Q9BVG4 233 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 ZFAND3Q9H8U3 227 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 GNB4Q9HAV0 340 aa11.67□□□□□ -0.54
COL4A5-203ENST00000470339 NIPBLQ6KC79 2804 aaeCLIP11.66□□□□□ -0.54
COL4A5-203ENST00000470339 A0A1B0GUS0 222 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 NDUFA4O00483 81 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 HMGB3O15347 200 aaKnown RBP11.66□□□□□ -0.54
COL4A5-203ENST00000470339 FGF8P55075 233 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-203ENST00000470339 FAM167A-AS1Q96KT0 104 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 SHANK2-AS3Q9BTD1 123 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 SLC25A39Q9BZJ4 359 aaPredicted RBP11.66□□□□□ -0.54
COL4A5-203ENST00000470339 RABAC1Q9UI14 185 aa11.66□□□□□ -0.54
COL4A5-203ENST00000470339 CLPSL1A2RUU4 121 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 ANKRD34BA5PLL1 514 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 IFNA1P01562 189 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 TRBV12-3P01733 135 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 ARL14EPLP0DKL9 152 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 USF2Q15853 346 aaPredicted RBP11.65□□□□□ -0.54
COL4A5-203ENST00000470339 TCTEX1D4Q5JR98 221 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 GPHB5Q86YW7 130 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 SUN5Q8TC36 379 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 UHRF2Q96PU4 802 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 SCRT1Q9BWW7 348 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 SLC25A2Q9BXI2 301 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 MANBALQ9NQG1 85 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
COL4A5-203ENST00000470339 CUBNO60494 3623 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 A0A1B0GV50 99 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 H3BRN7 92 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 I3L521 148 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 NDUFS6O75380 124 aaKnown RBP11.64□□□□□ -0.55
COL4A5-203ENST00000470339 HSPB1P04792 205 aaKnown RBP11.64□□□□□ -0.55
COL4A5-203ENST00000470339 GCHFRP30047 84 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 PROK1P58294 105 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 PEA15Q15121 130 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 GUK1Q16774 197 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 MORN5Q5VZ52 161 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 C4orf3Q8WVX3 66 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 TMEM14CQ9P0S9 112 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 RNF114Q9Y508 228 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 ARL2-SNX15V9GYD0 113 aa11.64□□□□□ -0.55
COL4A5-203ENST00000470339 OR7C2O60412 319 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 CD5P06127 495 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 RIPPLY3P57055 190 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 FAM106AQ4KMX7 169 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 METTL26Q96S19 204 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 OR51M1Q9H341 326 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 TMPRSS5Q9H3S3 457 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 GNG13Q9P2W3 67 aa11.63□□□□□ -0.55
COL4A5-203ENST00000470339 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 IGHV3-35A0A0C4DH35 117 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 ZNF98A6NK75 572 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 EIF3GO75821 320 aaKnown RBP eCLIP11.62□□□□□ -0.55
COL4A5-203ENST00000470339 BCL2P10415 239 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 NPPCP23582 126 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 CRYBB3P26998 211 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 ZNF506Q5JVG8 444 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 C1orf194Q5T5A4 169 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 ZNF503Q96F45 646 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 OR5B12Q96R08 314 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 CITED4Q96RK1 184 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 TXNDC17Q9BRA2 123 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 PAXXQ9BUH6 204 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 EIF5A2Q9GZV4 153 aaKnown RBP11.62□□□□□ -0.55
COL4A5-203ENST00000470339 VAX2Q9UIW0 290 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 U3KQE9 123 aa11.62□□□□□ -0.55
COL4A5-203ENST00000470339 LOC102723971A0A1B0GUV8 181 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 K7EMT4 169 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 ZP3P21754 424 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 BPIFA4PQ86YQ2 179 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 IQCF2Q8IXL9 164 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 GPR82Q96P67 336 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
COL4A5-203ENST00000470339 SETD2Q9BYW2 2564 aaPredicted RBP11.61□□□□□ -0.55
COL4A5-203ENST00000470339 LGALS9O00182 355 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 GP9P14770 177 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 ICAM4Q14773 271 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 HAGHQ16775 308 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 RPEL1Q2QD12 228 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 TOR2AQ5JU69 321 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 FXYD5Q96DB9 178 aa11.6□□□□□ -0.55
COL4A5-203ENST00000470339 TSSC4Q9Y5U2 329 aaPredicted RBP11.6□□□□□ -0.55
COL4A5-203ENST00000470339 A0A1W2PRE2 83 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 BUB3O43684 328 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 ATP6V1G1O75348 118 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 HIST1H1EP10412 219 aaKnown RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 CD28P10747 220 aa11.59□□□□□ -0.55
COL4A5-203ENST00000470339 RPL7P18124 248 aaKnown RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 UBE2L3P68036 154 aaKnown RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 SRSF3P84103 164 aaKnown RBP11.59□□□□□ -0.55
COL4A5-203ENST00000470339 FOXL1Q12952 345 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms