RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 NPBQ8NG41 125 aa6.36□□□□□ -1.39
SMC4-212ENST00000470240 BORCS7Q96B45 105 aa6.36□□□□□ -1.39
SMC4-212ENST00000470240 RITA1Q96K30 269 aa6.36□□□□□ -1.39
SMC4-212ENST00000470240 NDUFAF3Q9BU61 184 aa6.36□□□□□ -1.39
SMC4-212ENST00000470240 AAMDCQ9H7C9 122 aa6.36□□□□□ -1.39
SMC4-212ENST00000470240 IGHV3-21A0A0B4J1V1 117 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 TRAV34A0A0B4J273 112 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 TRBV6-1A0A0K0K1D8 114 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 SERTM2A0A1B0GWG4 89 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 FAM231BA6NCW3 169 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 I3L2K1 104 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 NDUFA3O95167 84 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 TCRAP04437 139 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 APELAP0DMC3 54 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 PSG1P11464 419 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 GP9P14770 177 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 CSN1S1P47710 185 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 AMTP48728 403 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 MFAP2P55001 183 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 MFAP4P55083 255 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 ARF6P62330 175 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 GNG5P63218 68 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 MRGPRG-AS1Q2M3A8 158 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 C1orf194Q5T5A4 169 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 ZNF600Q6ZNG1 722 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 ZNF664Q8N3J9 261 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 NHLRC2Q8NBF2 726 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 NUDT10Q8NFP7 164 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 ARPC1AQ92747 370 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 NUDT11Q96G61 164 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 ZNF48Q96MX3 618 aaPredicted RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 HSPB9Q9BQS6 159 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 VAMP8Q9BV40 100 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 SLC25A39Q9BZJ4 359 aaPredicted RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 GFRA4Q9GZZ7 299 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 MRPL36Q9P0J6 103 aaKnown RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 MRPL27Q9P0M9 148 aaKnown RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 ZMAT5Q9UDW3 170 aaKnown RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 TBL2Q9Y4P3 447 aaKnown RBP6.35□□□□□ -1.39
SMC4-212ENST00000470240 KLF12Q9Y4X4 402 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 HILPDAQ9Y5L2 63 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 SPEGQ15772 3267 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 TTC28Q96AY4 2481 aa6.35□□□□□ -1.39
SMC4-212ENST00000470240 FBLL1A6NHQ2 334 aaKnown RBP6.34□□□□□ -1.39
SMC4-212ENST00000470240 NPIPB5A8MRT5 1133 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 HIGD1CA8MV81 97 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 A8MWP6 167 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 ODF3BA8MYP8 253 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 CHEK1O14757 476 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 LTAP01374 205 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 HLA-DRB1P01911 266 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 FAM106CPP0CH98 169 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 CT45A10P0DMU9 189 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 HBBP68871 147 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 SLC35B1P78383 322 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 ADORA2A-AS1P86434 159 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 PDE6HQ13956 83 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 C5orf64Q2M2E5 130 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 FBLN7Q53RD9 439 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 Q56UQ5 140 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 Q6AWC8 147 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 C11orf71Q6IPW1 123 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 ZNF562Q6V9R5 426 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 Q86TA4 180 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 DTX2Q86UW9 622 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 TMEM75Q8N9X5 138 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 MBD6Q96DN6 1003 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 RNF125Q96EQ8 232 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 C14orf144Q96I85 54 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 TBX15Q96SF7 602 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 NEU1Q99519 415 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 SHANK2-AS3Q9BTD1 123 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 GNB4Q9HAV0 340 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 ZFP30Q9Y2G7 519 aa6.34□□□□□ -1.39
SMC4-212ENST00000470240 ACACAQ13085 2346 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 KIR2DL5BA0A0G2JN68 375 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 KIR2DL5BA0A0G2JPC4 375 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 A0A1B0GW15 77 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 NCBP2LA6PVI3 153 aaKnown RBP6.33□□□□□ -1.4
SMC4-212ENST00000470240 H3BRN7 92 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 M0QZK8 103 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 BMPR1BO00238 502 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 ZNF324O75467 553 aaPredicted RBP6.33□□□□□ -1.4
SMC4-212ENST00000470240 HSBP1O75506 76 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 IL4P05112 153 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 PAX1P15863 534 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 TMEM11P17152 192 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 PMCHP20382 165 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 RAB9AP51151 201 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 KRTDAPP60985 99 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 PSG9Q00887 426 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 RBPMS2Q6ZRY4 209 aaKnown RBP6.33□□□□□ -1.4
SMC4-212ENST00000470240 LCNL1Q6ZST4 164 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 VMO1Q7Z5L0 202 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 KIR2DL5AQ8N109 375 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 IGFBPL1Q8WX77 278 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 CFHR4Q92496 578 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 LINC00479Q96M42 142 aa6.33□□□□□ -1.4
SMC4-212ENST00000470240 TXN2Q99757 166 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms