RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 DUSP14O95147 198 aaKnown RBP13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 ELK1P19419 428 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 ZNF90Q03938 601 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 GPR141Q7Z602 305 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 FAM219AQ8IW50 185 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 OR11H7Q8NGC8 314 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 CACNG5Q9UF02 275 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 VPS13BQ7Z7G8 4022 aa13.14□□□□□ -0.31
NCKIPSD-209ENST00000470006 TRAV12-2A0A075B6T6 113 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 TRAV26-1A0A087WT03 109 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 A0A0J9YY99 117 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 IFNA5P01569 189 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 SMR3BP02814 79 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 ZNF182P17025 639 aaPredicted RBP13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 UCP1P25874 307 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 MEOX2P50222 304 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 CNN1P51911 297 aaKnown RBP13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 ZFAND1Q8TCF1 268 aa13.13□□□□□ -0.31
NCKIPSD-209ENST00000470006 PLAC8L1A1L4L8 177 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 SNRPGP15A8MWD9 76 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 CRXO43186 299 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 FABP1P07148 127 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 GALR1P47211 349 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 LINC00315P59091 139 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 OR2F1Q13607 317 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 ESRGQ1W209 222 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 RNASE12Q5GAN4 147 aaKnown RBP13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 ARRDC1Q8N5I2 433 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 RSG1Q9BU20 258 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 SLC25A22Q9H936 323 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 PPP1R14DQ9NXH3 145 aa13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 TIMM8BQ9Y5J9 83 aaPredicted RBP13.12□□□□□ -0.31
NCKIPSD-209ENST00000470006 GABARAPH6UMI1 98 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 GABARAPO95166 117 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 TGFBR1P36897 503 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 ERVFC1-1P60608 527 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 AARDQ4LEZ3 155 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 RNASE10Q5GAN6 216 aaKnown RBP13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 OR10J6PQ8NGY7 276 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 RXFP4Q8TDU9 374 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 SLC35E1Q96K37 410 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 UPK3BQ9BT76 320 aa13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 NOP10Q9NPE3 64 aaKnown RBP13.11□□□□□ -0.31
NCKIPSD-209ENST00000470006 A8MTW9 85 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 FAM229AH3BQW9 127 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 M6PRP20645 277 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 MEF2DQ14814 521 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 C16orf74Q96GX8 76 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 COMMD3Q9UBI1 195 aa13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 MRPS16Q9Y3D3 137 aaKnown RBP13.1□□□□□ -0.31
NCKIPSD-209ENST00000470006 B3GALNT1O75752 331 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 TNFAIP8O95379 198 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 OR5AC1P0C628 307 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 RPS19P39019 145 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 RHOBP62745 196 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 NEDD8Q15843 81 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 SCGB2B2Q4G0G5 96 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 IGFL4Q6B9Z1 124 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 CDPF1Q6NVV7 123 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 TMEM144Q7Z5S9 345 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 LHFPL1Q86WI0 220 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 OR13C8Q8NGS7 320 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 RBPMSQ93062 196 aaKnown RBP13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 C17orf77Q96MU5 243 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 TMEM222Q9H0R3 208 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 RAB26Q9ULW5 256 aa13.09□□□□□ -0.31
NCKIPSD-209ENST00000470006 TEX13DA0A0J9YY54 714 aaPredicted RBP13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 CDS2O95674 445 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 TAS2R60P59551 318 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 FGL1Q08830 312 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 GAMTQ14353 236 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 LGI3Q8N145 548 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 TMEM256Q8N2U0 113 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 ZNF503Q96F45 646 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 SLC25A32Q9H2D1 315 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 U3KQ87 197 aa13.08□□□□□ -0.32
NCKIPSD-209ENST00000470006 ZNF701M0R085 212 aaPredicted RBP13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 ADAP1O75689 374 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 ICAM4Q14773 271 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 TMEM268Q5VZI3 342 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 SELENOHQ8IZQ5 122 aaKnown RBP13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 RNF182Q8N6D2 247 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 ZNF738Q8NE65 137 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 LHFPL5Q8TAF8 219 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 MARCH1Q8TCQ1 289 aa13.07□□□□□ -0.32
NCKIPSD-209ENST00000470006 IGKV1D-37A0A075B6S9 117 aa13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 CD3DP04234 171 aa13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 KRTAP10-1P60331 282 aa13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 LSM3P62310 102 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 TERB2Q8NHR7 220 aa13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 CACFD1Q9UGQ2 172 aa13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 C14orf166Q9Y224 244 aaKnown RBP13.06□□□□□ -0.32
NCKIPSD-209ENST00000470006 APOA1P02647 267 aa13.05□□□□□ -0.32
NCKIPSD-209ENST00000470006 SULT1A3P0DMM9 295 aa13.05□□□□□ -0.32
NCKIPSD-209ENST00000470006 SULT1A4P0DMN0 295 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms