RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 LEMD1Q68G75 181 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 ZNF600Q6ZNG1 722 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 TMEM86BQ8N661 226 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 CLRN3Q8NCR9 226 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 SUN5Q8TC36 379 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 USMG5Q96IX5 58 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 ARL2-SNX15V9GYD0 113 aa14.74□□□□□ -0.05
SMC4-209ENST00000468653 F6UZH7 168 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 M0R036 132 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 IGLV1-40P01703 118 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 CFHR3Q02985 330 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 ATP6V0BQ99437 205 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 NIPSNAP3BQ9BS92 247 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 IGHV3-35A0A0C4DH35 117 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 H3BQ15 152 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 TGOLN2O43493 480 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 USF2Q15853 346 aaPredicted RBP14.73□□□□□ -0.05
SMC4-209ENST00000468653 ZNF674Q2M3X9 581 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 RPUSD4Q96CM3 377 aaKnown RBP14.73□□□□□ -0.05
SMC4-209ENST00000468653 SHANK2-AS3Q9BTD1 123 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 KLK15Q9H2R5 256 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 ZNF702PQ9H963 129 aa14.73□□□□□ -0.05
SMC4-209ENST00000468653 ACANP16112 2415 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 ZNF469Q96JG9 3925 aaPredicted RBP14.72□□□□□ -0.05
SMC4-209ENST00000468653 MYO9AB2RTY4 2548 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 ZNF727A8MUV8 499 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 H3BRN7 92 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 ZNF329Q86UD4 541 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 SONP18583 2426 aaKnown RBP14.72□□□□□ -0.05
SMC4-209ENST00000468653 ZFHX3Q15911 3703 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 NOTCH2Q04721 2471 aa14.72□□□□□ -0.05
SMC4-209ENST00000468653 A0A0G2JLM5 398 aa14.71□□□□□ -0.05
SMC4-209ENST00000468653 RAB9AP51151 201 aa14.71□□□□□ -0.05
SMC4-209ENST00000468653 FXYD5Q96DB9 178 aa14.71□□□□□ -0.05
SMC4-209ENST00000468653 SMIM7Q9BQ49 75 aa14.71□□□□□ -0.05
SMC4-209ENST00000468653 C20orf24Q9BUV8 137 aa14.71□□□□□ -0.05
SMC4-209ENST00000468653 MXRA5Q9NR99 2828 aa14.71□□□□□ -0.06
SMC4-209ENST00000468653 A0A1W2PRE2 83 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 BMPR1BO00238 502 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 IGHG4P01861 327 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 SCGB2A2Q13296 93 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 BTN1A1Q13410 526 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 PARLQ9H300 379 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 GP9P14770 177 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 RELQ04864 619 aaPredicted RBP14.7□□□□□ -0.06
SMC4-209ENST00000468653 FAM74A3Q4VXF1 159 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 AWAT1Q58HT5 328 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 TOMM20LQ6UXN7 152 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 LCNL1Q6ZST4 164 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 TVP23CQ96ET8 276 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 RABAC1Q9UI14 185 aa14.7□□□□□ -0.06
SMC4-209ENST00000468653 PPP5D1E7EU14 171 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 NDUFB4O95168 129 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 IGHV3-11P01762 117 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 SNRPCP09234 159 aaKnown RBP14.69□□□□□ -0.06
SMC4-209ENST00000468653 NBEAP1P0C6P0 100 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 NPPCP23582 126 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 S100A7P31151 101 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 SLC35B1P78383 322 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 BLNKQ8WV28 456 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 SMR3AQ99954 134 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 TMEM160Q9NX00 188 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 TMEM14CQ9P0S9 112 aa14.69□□□□□ -0.06
SMC4-209ENST00000468653 AKAP9Q99996 3911 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 SCO2A0A1W2PP80 73 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 DNAJC9-AS1A6NH13 148 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 ZNF98A6NK75 572 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 ARL3P36405 182 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 SUMO1P63165 101 aaKnown RBP14.68□□□□□ -0.06
SMC4-209ENST00000468653 BPIFA4PQ86YQ2 179 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 IGHV3OR16-8A0A075B7F1 116 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.68□□□□□ -0.06
SMC4-209ENST00000468653 TMEM89A2RUT3 159 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 GGTLC3B5MD39 225 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 PSMB8P28062 276 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 OR4X2Q8NGF9 303 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 RPS10P5Q9NQ39 176 aa14.68□□□□□ -0.06
SMC4-209ENST00000468653 C7orf77A4D0Y5 90 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 TMEM241Q24JQ0 296 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 Q8N2B8 174 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 ZFAND3Q9H8U3 227 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 NAT8Q9UHE5 227 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 RNF24Q9Y225 148 aa14.67□□□□□ -0.06
SMC4-209ENST00000468653 LY6G6DO95868 133 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 HIST1H1EP10412 219 aaKnown RBP14.66□□□□□ -0.06
SMC4-209ENST00000468653 RANP62826 216 aaKnown RBP14.66□□□□□ -0.06
SMC4-209ENST00000468653 RHEBQ15382 184 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 ZNF343Q6P1L6 599 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 TEX38Q6PEX7 206 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 C10orf99Q6UWK7 81 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 OR4F17Q8NGA8 305 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 ZNF414Q96IQ9 312 aa14.66□□□□□ -0.06
SMC4-209ENST00000468653 TRBV12-3P01733 135 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 AKR1C3P42330 323 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 PNRC1Q12796 327 aaPredicted RBP14.65□□□□□ -0.06
SMC4-209ENST00000468653 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.65□□□□□ -0.06
SMC4-209ENST00000468653 C11orf52Q96A22 123 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 SDF2L1Q9HCN8 221 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 FAM181BA6NEQ2 426 aa14.65□□□□□ -0.06
SMC4-209ENST00000468653 H3BTX0 84 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms