RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 C21orf62Q9NYP8 219 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 PAM16Q9Y3D7 125 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 SONP18583 2426 aaKnown RBP3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TNCP24821 2201 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 TLN2Q9Y4G6 2542 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 ZANQ9Y493 2812 aa3.15□□□□□ -1.91
TMEM39A-204ENST00000468545 SETXQ7Z333 2677 aaKnown RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 IGHV3OR16-8A0A075B7F1 116 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 A0A0G2JLM5 398 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CLPSL1A2RUU4 121 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 PRSS46E5RG02 174 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 PPP5D1E7EU14 171 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 C17orf112F2Z3M2 114 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CLN5O75503 358 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 EIF3GO75821 320 aaKnown RBP eCLIP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 OR2C1O95371 312 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CFDP00746 253 aaPredicted RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 IGHG4P01861 327 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 TPT1P13693 172 aaKnown RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ATP6V0CP27449 155 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 GPR183P32249 361 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CRIP2P52943 208 aaPredicted RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 EIF5AP63241 154 aaKnown RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF90Q03938 601 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF266Q14584 549 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF345Q14585 488 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 NSUN5P1Q3KNT7 163 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 FFAR4Q5NUL3 377 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 MIC13Q5XKP0 118 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ALKAL2Q6UX46 152 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 TMEM182Q6ZP80 229 aaPredicted RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CYP2G1PQ6ZSU1 146 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 C18orf65Q6ZTR6 163 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 TMEM144Q7Z5S9 345 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 BAP18Q8IXM2 172 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 Q8N2B8 174 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF491Q8N8L2 437 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 NECAP1Q8NC96 275 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 BPIFCQ8NFQ6 507 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 PCNPQ8WW12 178 aaKnown RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 TMED6Q8WW62 240 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CACNG8Q8WXS5 425 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 CXorf58Q96LI9 332 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 MGST2Q99735 147 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 PBDC1Q9BVG4 233 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 GGACTQ9BVM4 153 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 WDR61Q9GZS3 305 aaKnown RBP3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 SH3BGRL3Q9H299 93 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 C16orf95Q9H693 158 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 SLA2Q9H6Q3 261 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 DOK5Q9P104 306 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 NAV3Q8IVL0 2385 aa3.14□□□□□ -1.91
TMEM39A-204ENST00000468545 HIVEP1P15822 2718 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 OTOGQ6ZRI0 2925 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 IGKV1D-37A0A075B6S9 117 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TRAV30A0A087WSZ9 112 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TRBV7-1A0A0A6YYK4 115 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TRBV9A0A0B4J1U6 114 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 A0A1B0GV50 99 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF320A2RRD8 509 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 FAM223BA6NKX1 122 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 H3BUA1 57 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 AGPAT2O15120 278 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 HMGB3O15347 200 aaKnown RBP3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 NUPL2O15504 423 aaKnown RBP3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF207O43670 478 aaKnown RBP3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 SCGB2A1O75556 95 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 NDUFA7O95182 113 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 OR5G3P0C626 314 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 RD3LP0DJH9 198 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ORM2P19652 201 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 PSMB8P28062 276 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ARL3P36405 182 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 KRTAP10-3P60369 221 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 KRTAP10-11P60412 298 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 LYZP61626 148 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF616Q08AN1 781 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 KIAA0141Q14154 515 aaPredicted RBP3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 VWC2Q2TAL6 325 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 GCSAMLQ5JQS6 135 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TCTEX1D4Q5JR98 221 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 FAM74A1Q5RGS3 127 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 AKR1C8PQ5T2L2 129 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 PVRIGQ6DKI7 326 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 FAM122CQ6P4D5 195 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 Q6ZRG5 221 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 FAM223AQ8IWN6 122 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 THAP8Q8NA92 274 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 NEXN-AS1Q8NBZ9 246 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 OR51G1Q8NGK1 321 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 OR1B1Q8NGR6 318 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 OR4X1Q8NH49 305 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 ZNF502Q8TBZ5 544 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 Q8WTZ3 238 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 GNPNAT1Q96EK6 184 aaPredicted RBP3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 USMG5Q96IX5 58 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 DUX3Q96PT4 197 aa3.13□□□□□ -1.91
TMEM39A-204ENST00000468545 TXN2Q99757 166 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms