RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 CAMPP49913 170 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 DLX6P56179 175 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 FBLN7Q53RD9 439 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 LDLRAD2Q5SZI1 272 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 STXBP6Q8NFX7 210 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 SSBP4Q9BWG4 385 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 WNT10AQ9GZT5 417 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 C7orf69Q9H7B7 122 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 COX11Q9Y6N1 276 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 IGLC7A0M8Q6 106 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 TMEM238C9JI98 176 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 APELAP0DMC3 54 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 GPR6P46095 362 aaPredicted RBP12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 HNRNPA3P51991 378 aaKnown RBP12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 ZNF137PP52743 207 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 TNXAQ16473 311 aa12.65□□□□□ -0.38
TSPAN4-211ENST00000468468 IGHV3-21A0A0B4J1V1 117 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 HYPMO75409 117 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 TOMM40O96008 361 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 LGALS7P47929 136 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 NAV3Q8IVL0 2385 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 CRYGCP07315 174 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 NBEAP1P0C6P0 100 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 IGHV1-8P0DP01 117 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 TMEM155Q4W5P6 130 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 HSBP1O75506 76 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 TRGV9Q99603 122 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 TMUB1Q9BVT8 246 aa12.64□□□□□ -0.39
TSPAN4-211ENST00000468468 PKDREJQ9NTG1 2253 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 VWC2LB2RUY7 222 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 RBPJQ06330 500 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 ZNF738Q8NE65 137 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 RNASE6Q93091 150 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 GPR82Q96P67 336 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 CNTFRP26992 372 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 RPL27AP46776 148 aaKnown RBP12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 KLF5Q13887 457 aaPredicted RBP12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 C16orf54Q6UWD8 224 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 ATOH7Q8N100 152 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 CLEC7AQ9BXN2 247 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 UQCR10Q9UDW1 63 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 KLF12Q9Y4X4 402 aa12.63□□□□□ -0.39
TSPAN4-211ENST00000468468 SPTA1P02549 2419 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 IGHV2-70DA0A0C4DH43 119 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 VSTM5A8MXK1 200 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 H3BTX0 84 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 IGLC3P0DOY3 106 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 PRR31Q5SQ13 230 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 TCF24Q7RTU0 167 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 TEX45Q8NA69 505 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 CSTL1Q9H114 145 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 DYNLRB1Q9NP97 96 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 CHTOPQ9Y3Y2 248 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 OR2J3O76001 311 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 LCN12Q6JVE5 192 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 TMEM133Q9H2Q1 129 aa12.62□□□□□ -0.39
TSPAN4-211ENST00000468468 M0R2Z0 102 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 PLXNB1O43157 2135 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 CA7P43166 264 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 DLX1P56177 255 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 PVRIGQ6DKI7 326 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 LINC00322Q6ZN03 302 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 ATP5L2Q7Z4Y8 100 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 OR2D3Q8NGH3 330 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 KAAG1Q9UBP8 84 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 SPTBN4Q9H254 2564 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 A0A1B0GXF2 115 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 PRB3Q04118 309 aaPredicted RBP12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 TMEM116Q8NCL8 245 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 SMIM12Q96EX1 92 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 MLST8Q9BVC4 326 aa12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 RPP21Q9H633 154 aaKnown RBP12.61□□□□□ -0.39
TSPAN4-211ENST00000468468 C5orf17Q8NAS9 161 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 VKORC1Q9BQB6 163 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 FAM181BA6NEQ2 426 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 GP9P14770 177 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 Q9H3A6 140 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 TP73-AS1Q9UF72 201 aa12.6□□□□□ -0.39
TSPAN4-211ENST00000468468 OCIAD2Q56VL3 154 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 EBLN2Q6P2I7 272 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 KLHDC1Q8N7A1 406 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 FMC1Q96HJ9 113 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 CST9LQ9H4G1 147 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 A8MWL6 223 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 SHISA9B4DS77 424 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 CRYGBP07316 175 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 HBBP68871 147 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 VAMP3Q15836 100 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 PMCHL1Q16048 86 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 C8orf46Q8TAG6 207 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 SIGLEC9Q9Y336 463 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 POLEQ07864 2286 aa12.59□□□□□ -0.39
TSPAN4-211ENST00000468468 TMEM238LA0A1B0GVL6 79 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 E7EQL1 145 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 P01737 135 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 TCRAP04437 139 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 PSG1P11464 419 aa12.58□□□□□ -0.39
TSPAN4-211ENST00000468468 PRSS22Q9GZN4 317 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms