RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 PFDN2Q9UHV9 154 aa12.92□□□□□ -0.34
LINC00888-201ENST00000468380 CD3DP04234 171 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 OR5AC1P0C628 307 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 CNN1P51911 297 aaKnown RBP12.91□□□□□ -0.34
LINC00888-201ENST00000468380 LYZP61626 148 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 RNASE12Q5GAN4 147 aaKnown RBP12.91□□□□□ -0.34
LINC00888-201ENST00000468380 BAP18Q8IXM2 172 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 OR8I2Q8N0Y5 310 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 OR4D10Q8NGI6 311 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 OR4C16Q8NGL9 310 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 COMMD3Q9UBI1 195 aa12.91□□□□□ -0.34
LINC00888-201ENST00000468380 SMIM31A0A1B0GVY4 71 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 GAMTQ14353 236 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 ESRGQ1W209 222 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 TTC32Q5I0X7 151 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 IGFL4Q6B9Z1 124 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 ARRDC1Q8N5I2 433 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 CCDC71LQ8N9Z2 235 aa12.9□□□□□ -0.34
LINC00888-201ENST00000468380 TRAV12-2A0A075B6T6 113 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 ZFP92A6NM28 416 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 INSP01308 110 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 APOA1P02647 267 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 LSM3P62310 102 aaKnown RBP12.89□□□□□ -0.35
LINC00888-201ENST00000468380 OR2F1Q13607 317 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 RNASE10Q5GAN6 216 aaKnown RBP12.89□□□□□ -0.35
LINC00888-201ENST00000468380 Q6ZRN7 208 aaPredicted RBP12.89□□□□□ -0.35
LINC00888-201ENST00000468380 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 ZFAND1Q8TCF1 268 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 MARCH1Q8TCQ1 289 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 RBPMSQ93062 196 aaKnown RBP12.89□□□□□ -0.35
LINC00888-201ENST00000468380 UPK3BQ9BT76 320 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 ZNF586Q9NXT0 402 aa12.89□□□□□ -0.35
LINC00888-201ENST00000468380 A0A1W2PPQ1 181 aa12.88□□□□□ -0.35
LINC00888-201ENST00000468380 SNRPGP15A8MWD9 76 aa12.88□□□□□ -0.35
LINC00888-201ENST00000468380 NOXA1Q86UR1 476 aa12.88□□□□□ -0.35
LINC00888-201ENST00000468380 RTBDNQ9BSG5 229 aaPredicted RBP12.88□□□□□ -0.35
LINC00888-201ENST00000468380 RSG1Q9BU20 258 aa12.88□□□□□ -0.35
LINC00888-201ENST00000468380 SLC25A32Q9H2D1 315 aa12.88□□□□□ -0.35
LINC00888-201ENST00000468380 TEX13DA0A0J9YY54 714 aaPredicted RBP12.87□□□□□ -0.35
LINC00888-201ENST00000468380 B3GALNT1O75752 331 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 B2MP61769 119 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 PPP1R14BQ96C90 147 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 LINC01587Q99440 93 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 U3KQ87 197 aa12.87□□□□□ -0.35
LINC00888-201ENST00000468380 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 TRAV8-2A0A0B4J237 113 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 DUSP14O95147 198 aaKnown RBP12.86□□□□□ -0.35
LINC00888-201ENST00000468380 LINC00315P59091 139 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 OR5I1Q13606 314 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 GPR141Q7Z602 305 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 OR52I2Q8NH67 350 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 RXFP4Q8TDU9 374 aa12.86□□□□□ -0.35
LINC00888-201ENST00000468380 GNPNAT1Q96EK6 184 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-201ENST00000468380 SLC25A39Q9BZJ4 359 aaPredicted RBP12.86□□□□□ -0.35
LINC00888-201ENST00000468380 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 A0A0J9YY99 117 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 HPGDSO60760 199 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 GPX4P36969 197 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-201ENST00000468380 MEOX2P50222 304 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 SAMD13Q5VXD3 122 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 TMEM268Q5VZI3 342 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 LGI3Q8N145 548 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 RNF182Q8N6D2 247 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 FRZBQ92765 325 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 NAA60Q9H7X0 242 aa12.85□□□□□ -0.35
LINC00888-201ENST00000468380 NOP10Q9NPE3 64 aaKnown RBP12.85□□□□□ -0.35
LINC00888-201ENST00000468380 TIMM8BQ9Y5J9 83 aaPredicted RBP12.85□□□□□ -0.35
LINC00888-201ENST00000468380 SMR3BP02814 79 aaPredicted RBP12.84□□□□□ -0.35
LINC00888-201ENST00000468380 HTN1P15515 57 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 HOXA5P20719 270 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 GALR1P47211 349 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 TAS2R60P59551 318 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 KRTAP10-1P60331 282 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 SCGB2B2Q4G0G5 96 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 YIPF6Q96EC8 236 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 ZNF503Q96F45 646 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 RBKSQ9H477 322 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 SLC25A22Q9H936 323 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 MTFP1Q9UDX5 166 aa12.84□□□□□ -0.35
LINC00888-201ENST00000468380 MRPS16Q9Y3D3 137 aaKnown RBP12.84□□□□□ -0.35
LINC00888-201ENST00000468380 ZNF98A6NK75 572 aa12.83□□□□□ -0.36
LINC00888-201ENST00000468380 ZNF701M0R085 212 aaPredicted RBP12.83□□□□□ -0.36
LINC00888-201ENST00000468380 TRGV9Q99603 122 aa12.83□□□□□ -0.36
LINC00888-201ENST00000468380 PRR13Q9NZ81 148 aa12.83□□□□□ -0.36
LINC00888-201ENST00000468380 TMEM56-RWDD3S4R434 201 aa12.83□□□□□ -0.36
LINC00888-201ENST00000468380 BOLA2-SMG1P6H3BVE0 249 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 SULT1A3P0DMM9 295 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 SULT1A4P0DMN0 295 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 PRB4P10163 310 aaPredicted RBP12.82□□□□□ -0.36
LINC00888-201ENST00000468380 TBPP20226 339 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 M6PRP20645 277 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 LINC00612Q8N6U2 182 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 RNASE8Q8TDE3 154 aaKnown RBP12.82□□□□□ -0.36
LINC00888-201ENST00000468380 DTD1Q8TEA8 209 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 C16orf74Q96GX8 76 aa12.82□□□□□ -0.36
LINC00888-201ENST00000468380 SLC35E1Q96K37 410 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms