RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 WDR12Q9GZL7 423 aaKnown RBP12.46□□□□□ -0.41
SSBP1-207ENST00000468267 C11orf68Q9H3H3 251 aaKnown RBP12.46□□□□□ -0.41
SSBP1-207ENST00000468267 GSKIPQ9P0R6 139 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 SLC45A2Q9UMX9 530 aa12.46□□□□□ -0.41
SSBP1-207ENST00000468267 NUPR2A6NF83 97 aa12.45□□□□□ -0.42
SSBP1-207ENST00000468267 C4BPBP20851 252 aa12.45□□□□□ -0.42
SSBP1-207ENST00000468267 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-207ENST00000468267 CEMP1Q6PRD7 247 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-207ENST00000468267 TMEM14EPQ6UXP3 125 aa12.45□□□□□ -0.42
SSBP1-207ENST00000468267 TMEM182Q6ZP80 229 aaPredicted RBP12.45□□□□□ -0.42
SSBP1-207ENST00000468267 OR8I2Q8N0Y5 310 aa12.45□□□□□ -0.42
SSBP1-207ENST00000468267 BPIFCQ8NFQ6 507 aa12.45□□□□□ -0.42
SSBP1-207ENST00000468267 H3BMM0 161 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 SCGB1D2O95969 90 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 ID1P41134 155 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 TAS2R30P59541 319 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 S100ZQ8WXG8 99 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 NUDT15Q9NV35 164 aa12.44□□□□□ -0.42
SSBP1-207ENST00000468267 SMCO3A2RU48 225 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 ZNF98A6NK75 572 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 SOCS3O14543 225 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 TSC22D2O75157 780 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 CCNKO75909 580 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-207ENST00000468267 METTL15P1P0C7V9 234 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 ORM2P19652 201 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 PSMB3P49720 205 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 DLK1P80370 383 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 CSNK1G2-AS1Q8NCQ2 148 aa12.43□□□□□ -0.42
SSBP1-207ENST00000468267 ZNF431Q8TF32 576 aaPredicted RBP12.43□□□□□ -0.42
SSBP1-207ENST00000468267 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
SSBP1-207ENST00000468267 A6NHS1 94 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 ZNF705EA8MWA4 302 aaPredicted RBP12.42□□□□□ -0.42
SSBP1-207ENST00000468267 FNDC10F2Z333 226 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 CCSO14618 274 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 DEFB4AO15263 64 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 H2AFB2P0C5Z0 115 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 HLA-DRB4P13762 266 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 ZNF846Q147U1 533 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 CYP2G1PQ6ZSU1 146 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 Q8NAQ8 132 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 LINC00052Q96N35 136 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 SEC22CQ9BRL7 303 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 TMEM147Q9BVK8 224 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 CLEC5AQ9NY25 188 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 TBC1D24Q9ULP9 559 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 HLA-DRB4X5D2U9 266 aa12.42□□□□□ -0.42
SSBP1-207ENST00000468267 FAM240BA0A1B0GVZ2 78 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 C7orf66A4D0T2 115 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 ISLRO14498 428 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 IL5P05113 134 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 S100A7P31151 101 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 GALR1P47211 349 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 NUTF2P61970 127 aaKnown RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 RRAS2P62070 204 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 SAMD13Q5VXD3 122 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 MZT2BQ6NZ67 158 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 C12orf45Q8N5I9 185 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 OR10P1Q8NGE3 313 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 OR1B1Q8NGR6 318 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 C11orf45Q8TAV5 145 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 MFFQ9GZY8 342 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 SLC25A32Q9H2D1 315 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 SAV1Q9H4B6 383 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 NPVFQ9HCQ7 196 aa12.41□□□□□ -0.42
SSBP1-207ENST00000468267 KLK5Q9Y337 293 aaPredicted RBP12.41□□□□□ -0.42
SSBP1-207ENST00000468267 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 FAM25EA8MYX2 175 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 RBMY1A1P0DJD3 496 aaKnown RBP12.4□□□□□ -0.42
SSBP1-207ENST00000468267 RBMY1CP0DJD4 496 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 MIFP14174 115 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 MEOX2P50222 304 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 DEFB1P60022 68 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 NANOS2P60321 138 aaKnown RBP12.4□□□□□ -0.42
SSBP1-207ENST00000468267 SELENOTP62341 195 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 ASAH1Q13510 395 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 RBMY1FQ15415 496 aaKnown RBP12.4□□□□□ -0.42
SSBP1-207ENST00000468267 GDF5OSQ5U4N7 250 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 GSG1LQ6UXU4 331 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 FOXI2Q6ZQN5 318 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 C17orf77Q96MU5 243 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 GPR82Q96P67 336 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 RSG1Q9BU20 258 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 C1QTNF4Q9BXJ3 329 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 SLC25A22Q9H936 323 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 MGAT4CQ9UBM8 478 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 X6R8D5 127 aa12.4□□□□□ -0.42
SSBP1-207ENST00000468267 IGHV4-28A0A0C4DH34 117 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 C5orf51A6NDU8 294 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 HYPMO75409 117 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 DEDDO75618 318 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 PLP1P60201 277 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 ARL16Q0P5N6 197 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 CLUHP3Q96NS8 147 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 GGACTQ9BVM4 153 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 DOK5Q9P104 306 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 XCL2Q9UBD3 114 aa12.39□□□□□ -0.43
SSBP1-207ENST00000468267 K7EPK0 472 aa12.38□□□□□ -0.43
SSBP1-207ENST00000468267 L7N2F9 121 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms