RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 SYNJ1O43426 1573 aa1.37□□□□□ -2.19
GAPVD1-211ENST00000467707 EIF4G3O43432 1585 aaKnown RBP1.37□□□□□ -2.19
GAPVD1-211ENST00000467707 CLASP1Q7Z460 1538 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 ECM29Q5VYK3 1845 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 NCALDP61601 193 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 GDF5OSQ5U4N7 250 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 HACD4Q5VWC8 232 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 TEX261Q6UWH6 196 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 SOSTDC1Q6X4U4 206 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 MROH2BQ7Z745 1585 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 OR2T35Q8NGX2 323 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 SLC25A21Q9BQT8 299 aaPredicted RBP1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 U3KQ87 197 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 ABCC10Q5T3U5 1492 aa1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 HELZ2Q9BYK8 2649 aaKnown RBP1.36□□□□□ -2.19
GAPVD1-211ENST00000467707 SBF1O95248 1867 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 DIP2BQ9P265 1576 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 ANAPC1Q9H1A4 1944 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 SOGA1O94964 1423 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 CCDC160A6NGH7 325 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 ATG12O94817 140 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 MPV17LQ2QL34 196 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 TMED4Q7Z7H5 227 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 S100A7AQ86SG5 101 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 Q8IYB0 196 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 OBSCN-AS1Q96MR7 158 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 PRNDQ9UKY0 176 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 C22orf24Q9Y442 160 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 LY96Q9Y6Y9 160 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 CFTRP13569 1480 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 CCDC88AQ3V6T2 1871 aa1.35□□□□□ -2.19
GAPVD1-211ENST00000467707 ALPK2Q86TB3 2170 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 INTS1Q8N201 2190 aaKnown RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 KDM6AO15550 1401 aaPredicted RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 TNS3Q68CZ2 1445 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 PRG4Q92954 1404 aaPredicted RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 MIA2Q96PC5 1412 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 KIF21BO75037 1637 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 TOP2BQ02880 1626 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 CAMSAP1Q5T5Y3 1602 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 DUXBA0A1W2PPF3 345 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 TCRBV4S1A1TA0A5B7 111 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 G3V2T6 193 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 M0R378 163 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 CST8O60676 142 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 AKR1C8PQ5T2L2 129 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 EIF5AL1Q6IS14 154 aaKnown RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 CLECL1Q8IZS7 167 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 OR10K1Q8NGX5 313 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 TMEM70Q9BUB7 260 aa1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 LYRM2Q9NU23 88 aaPredicted RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 MAGI1Q96QZ7 1491 aaPredicted RBP1.34□□□□□ -2.19
GAPVD1-211ENST00000467707 ABCC8Q09428 1581 aa1.34□□□□□ -2.2
GAPVD1-211ENST00000467707 EIF3AQ14152 1382 aaKnown RBP1.34□□□□□ -2.2
GAPVD1-211ENST00000467707 PPRC1Q5VV67 1664 aaKnown RBP1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 PTPRMP28827 1452 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 H7C1C5 153 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 HLA-EP13747 358 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 LCN6P62502 163 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 RPL19P84098 196 aaKnown RBP1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 POU6F1Q14863 301 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 FAM74A1Q5RGS3 127 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 ST6GALNAC3Q8NDV1 305 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 TP53RKQ96S44 253 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 KRTAP4-1Q9BYQ7 146 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 SH3BGRL3Q9H299 93 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 CHCHD2Q9Y6H1 151 aaPredicted RBP1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 PEG3Q9GZU2 1588 aa1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 ZNF106Q9H2Y7 1883 aaKnown RBP1.33□□□□□ -2.2
GAPVD1-211ENST00000467707 ARHGEF28Q8N1W1 1705 aaKnown RBP1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 POLA1P09884 1462 aaPredicted RBP1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 TEX14Q8IWB6 1497 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 MYOFQ9NZM1 2061 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 HEATR5BQ9P2D3 2071 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 CCL16O15467 120 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 IFNA1P01562 189 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 PHBP35232 272 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 ROMO1P60602 79 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 C4orf22Q6V702 233 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 PATE1Q8WXA2 126 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 NPCDR1Q9BY65 106 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 PBOV1Q9GZY1 135 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 CDC42SE1Q9NRR8 79 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 SSR3Q9UNL2 185 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 MADDQ8WXG6 1647 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 PTPRGP23470 1445 aa1.32□□□□□ -2.2
GAPVD1-211ENST00000467707 GRIN2AQ12879 1464 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 ARFGEF3Q5TH69 2177 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 MAPKBP1O60336 1514 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 DIDO1Q9BTC0 2240 aaKnown RBP1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 DNMBPQ6XZF7 1577 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 TARBP1Q13395 1621 aaKnown RBP1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 TMEM256-PLSCR3K7ERE1 68 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 BANF1O75531 89 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 APOA2P02652 100 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 DYNLT3P51808 116 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 GNG5P63218 68 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 AP3S1Q92572 193 aa1.31□□□□□ -2.2
GAPVD1-211ENST00000467707 MALSU1Q96EH3 234 aa1.31□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 218.2 ms