RNA–Protein interactions for RNA: ENST00000467308.1

TSSC4-208, Transcript of tumor suppressing subtransferable candidate 4, human

TSL 3

Gene TSSC4, Length 409 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TSSC4-208	ENST00000467308	BTNL8	Q6UX41	500 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	ZNF502	Q8TBZ5	544 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	NPIPB3	Q92617	1050 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	OVOL2	Q9BRP0	275 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	PSMG3	Q9BT73	122 aa	Predicted RBP	11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	GGTLC1	Q9BX51	225 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	C21orf62	Q9NYP8	219 aa		11.75	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGKV1OR2-108	A0A075B7D4	117 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	TRAV30	A0A087WSZ9	112 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	SMCO3	A2RU48	225 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	CXorf65	A6NEN9	183 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	GGCT	O75223	188 aa	Known RBP	11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	CLN5	O75503	358 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	SEC11B	P0C7V7	166 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	SPP1	P10451	314 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	FGF7	P21781	194 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	EEF1AKMT3	Q96AZ1	226 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	TRGV9	Q99603	122 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	KCNIP2	Q9NS61	270 aa		11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	MRPL36	Q9P0J6	103 aa	Known RBP	11.74	□□□□□ -0.53
TSSC4-208	ENST00000467308	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	MFSD2B	A6NFX1	497 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	PPP5D1	E7EU14	171 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308		F8W735	103 aa	Predicted RBP	11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	EDN2	P20800	178 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	CBLN1	P23435	193 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	SERF2	P84101	59 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	TEX261	Q6UWH6	196 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	GPHB5	Q86YW7	130 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	OR2G3	Q8NGZ4	309 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	ACY3	Q96HD9	319 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	MGST2	Q99735	147 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	NPCDR1	Q9BY65	106 aa		11.73	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGKV1D-37	A0A075B6S9	117 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	C17orf112	F2Z3M2	114 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	SCGB2A1	O75556	95 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGLC1	P0CG04	106 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	ATP6V0C	P27449	155 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	RPL29	P47914	159 aa	Known RBP	11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	CAMLG	P49069	296 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	SELENOT	P62341	195 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	WFDC3	Q8IUB2	231 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	TMEM61	Q8N0U2	210 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	ZNF709	Q8N972	641 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	HSD17B11	Q8NBQ5	300 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	SLC45A2	Q9UMX9	530 aa		11.72	□□□□□ -0.53
TSSC4-208	ENST00000467308	AGPAT2	O15120	278 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	OR2C1	O95371	312 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	CFD	P00746	253 aa	Predicted RBP	11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGKV1-17	P01599	117 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGHV3-48	P01763	117 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	FABP1	P07148	127 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	OR10J1	P30954	320 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	YPEL3	P61236	119 aa	Predicted RBP	11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PRR20E	P86478	221 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PRR20C	P86479	221 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PRR20D	P86480	221 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PRR20B	P86481	221 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PRR20A	P86496	221 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	IFITM2	Q01629	132 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	PMS2P11	Q13670	270 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	SPSB3	Q6PJ21	355 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	CEMP1	Q6PRD7	247 aa	Predicted RBP	11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	ZNF680	Q8NEM1	530 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	CCDC140	Q96MF4	163 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	TP53TG1	Q9Y2A0	90 aa		11.71	□□□□□ -0.53
TSSC4-208	ENST00000467308	IGHV3-21	A0A0B4J1V1	117 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	ZFP92	A6NM28	416 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308		A8MWP6	167 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	UMAD1	C9J7I0	102 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	IFNA7	P01567	189 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	CTSG	P08311	255 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	ATF4	P18848	351 aa	Predicted RBP	11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	CYP2G1P	Q6ZSU1	146 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	RSG1	Q9BU20	258 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	SLC25A32	Q9H2D1	315 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308	HERC2	O95714	4834 aa		11.7	□□□□□ -0.54
TSSC4-208	ENST00000467308		A0A0J9YWU9	116 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	TMEM213	A2RRL7	107 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	RGS13	O14921	159 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	GNG7	O60262	68 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	BMI1	P35226	326 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	RAB5C	P51148	216 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	FAM106A	Q4KMX7	169 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308		Q56UQ5	140 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308		Q6ZWC4	215 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	ZNF767P	Q75MW2	155 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	TMED6	Q8WW62	240 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	SH3BGRL3	Q9H299	93 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	MLX	Q9UH92	298 aa		11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	KLK5	Q9Y337	293 aa	Predicted RBP	11.69	□□□□□ -0.54
TSSC4-208	ENST00000467308	TRAV25	A0A0B4J276	109 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	NUPL2	O15504	423 aa	Known RBP	11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	MB	P02144	154 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	CLEC3B	P05452	202 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	LINC00869	P0C866	280 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	ARL3	P36405	182 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	TM4SF20	Q53R12	229 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	PXDC1	Q5TGL8	231 aa		11.68	□□□□□ -0.54
TSSC4-208	ENST00000467308	PXMP4	Q9Y6I8	212 aa		11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms