RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 A0A1B0GUT8 65 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 ZNF138P52744 262 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 ALKBH2Q6NS38 261 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 MRPL36Q9P0J6 103 aaKnown RBP15.82■□□□□ 0.12
SDF4-205ENST00000465727 CELSR3Q9NYQ7 3312 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 C9orf118A6NHY6 69 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 LAMTOR5O43504 91 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 PLP1P60201 277 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 RIGQ13278 110 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 FER1L6-AS1Q8NA97 138 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 OTORQ9NRC9 128 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 ZNRD1Q9P1U0 126 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 PROCRQ9UNN8 238 aa15.82■□□□□ 0.12
SDF4-205ENST00000465727 C22orf46C9J442 243 aa15.81■□□□□ 0.12
SDF4-205ENST00000465727 PVRIGQ6DKI7 326 aa15.81■□□□□ 0.12
SDF4-205ENST00000465727 FA2HQ7L5A8 372 aa15.81■□□□□ 0.12
SDF4-205ENST00000465727 CCL13Q99616 98 aa15.81■□□□□ 0.12
SDF4-205ENST00000465727 MCRIP2Q9BUT9 160 aaKnown RBP15.81■□□□□ 0.12
SDF4-205ENST00000465727 PPIAL4DF5H284 164 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 FAM216BQ8N7L0 139 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 C8orf46Q8TAG6 207 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 IGHV3-48P01763 117 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 FGF6P10767 208 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 MEF2CQ06413 473 aaPredicted RBP15.8■□□□□ 0.12
SDF4-205ENST00000465727 TEX45Q8NA69 505 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 TMEM116Q8NCL8 245 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 PRSS33Q8NF86 280 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 SARAFQ96BY9 339 aa15.8■□□□□ 0.12
SDF4-205ENST00000465727 SIVA1O15304 175 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 CSN3P07498 182 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 HOXB4P17483 251 aaPredicted RBP15.79■□□□□ 0.12
SDF4-205ENST00000465727 C3orf36Q3SXR2 165 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 C10orf55Q5SWW7 151 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 Q6AWC8 147 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 RPRMLQ8N4K4 120 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 OR9G4Q8NGQ1 327 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 OVOL3O00110 214 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 TEX36Q5VZQ5 186 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 PRSS3P2Q8NHM4 247 aa15.79■□□□□ 0.12
SDF4-205ENST00000465727 TMEM238C9JI98 176 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 G3V4G9 280 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 K7EP34 96 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 IGLV2-23P01705 113 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 CEACAM3P40198 252 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 TNFAIP6P98066 277 aaPredicted RBP15.78■□□□□ 0.12
SDF4-205ENST00000465727 VMA21Q3ZAQ7 101 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 DEFB108BQ8NET1 73 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 TMEM14CQ9P0S9 112 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 NAV3Q8IVL0 2385 aa15.78■□□□□ 0.12
SDF4-205ENST00000465727 A0A1W2PPI3 338 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 PAX2Q02962 417 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 HSD52Q0P140 79 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 LGALS9BQ3B8N2 356 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 LGALS9CQ6DKI2 356 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 BOD1L2Q8IYS8 172 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 TMEM186Q96B77 213 aa15.77■□□□□ 0.12
SDF4-205ENST00000465727 M0R1B8 84 aa15.77■□□□□ 0.11
SDF4-205ENST00000465727 IGLV2-11P01706 119 aa15.77■□□□□ 0.11
SDF4-205ENST00000465727 CIARTQ8N365 385 aaPredicted RBP15.77■□□□□ 0.11
SDF4-205ENST00000465727 RABAC1Q9UI14 185 aa15.77■□□□□ 0.11
SDF4-205ENST00000465727 INTS1Q8N201 2190 aaKnown RBP15.76■□□□□ 0.11
SDF4-205ENST00000465727 SAP30O75446 220 aa15.76■□□□□ 0.11
SDF4-205ENST00000465727 TCF15Q12870 199 aa15.76■□□□□ 0.11
SDF4-205ENST00000465727 C8orf31Q8N9H6 132 aa15.76■□□□□ 0.11
SDF4-205ENST00000465727 TIMM23BQ5SRD1 257 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 OR4X2Q8NGF9 303 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 OR5A1Q8NGJ0 315 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 HIGD1AQ9Y241 93 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 TIMM8BQ9Y5J9 83 aaPredicted RBP15.75■□□□□ 0.11
SDF4-205ENST00000465727 NCR2O95944 276 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 IGHV1-46P01743 117 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 ARMS2P0C7Q2 107 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 ATP1A1-AS1Q5TC04 95 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 VHLLQ6RSH7 139 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 PRNTQ86SH4 94 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 LINC00311Q8N616 119 aa15.75■□□□□ 0.11
SDF4-205ENST00000465727 URB1O60287 2271 aaKnown RBP15.75■□□□□ 0.11
SDF4-205ENST00000465727 APOBEC3AP31941 199 aaPredicted RBP15.74■□□□□ 0.11
SDF4-205ENST00000465727 ZNF493Q6ZR52 646 aa15.74■□□□□ 0.11
SDF4-205ENST00000465727 OR2K2Q8NGT1 345 aa15.74■□□□□ 0.11
SDF4-205ENST00000465727 SMAD7O15105 426 aaKnown RBP15.74■□□□□ 0.11
SDF4-205ENST00000465727 SNAI2O43623 268 aa15.74■□□□□ 0.11
SDF4-205ENST00000465727 NEGR1Q7Z3B1 354 aa15.74■□□□□ 0.11
SDF4-205ENST00000465727 TMEM75Q8N9X5 138 aa15.74■□□□□ 0.11
SDF4-205ENST00000465727 SRSF12Q8WXF0 261 aaKnown RBP15.74■□□□□ 0.11
SDF4-205ENST00000465727 CACNA1HO95180 2353 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 TRAV8-1A0A0A6YYK1 113 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 A0A0G2JLM5 398 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 A1L4Q6 167 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 MC5RP33032 325 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 LGALS7P47929 136 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 FOXE3Q13461 319 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 GOLT1AQ6ZVE7 132 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 JMJD8Q96S16 334 aa15.73■□□□□ 0.11
SDF4-205ENST00000465727 H3BUT2 72 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 SLC25A17O43808 307 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 SMIM17P0DL12 118 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 UQCRFS1P47985 274 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 NHLH1Q02575 133 aa15.72■□□□□ 0.11
SDF4-205ENST00000465727 KIR3DS1Q14943 382 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms