RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 HSPB3Q12988 150 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 C1DQ13901 141 aaKnown RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 MPV17LQ2QL34 196 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 ACSF3Q4G176 576 aaPredicted RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 HBMQ6B0K9 141 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 FAM53AQ6NSI3 398 aaPredicted RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 SLC25A47Q6Q0C1 308 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 GOLT1AQ6ZVE7 132 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 ATOH7Q8N100 152 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 C1orf158Q8N1D5 194 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 C10orf111Q8N326 155 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 CLDN19Q8N6F1 224 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 OR11H6Q8NGC7 330 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 OR10P1Q8NGE3 313 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 OR10AG1Q8NH19 301 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 OR10G6Q8NH81 332 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 PIFOQ8TCI5 191 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 TMEM37Q8WXS4 190 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 AQP3Q92482 292 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 PLEKHB2Q96CS7 222 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 S100A16Q96FQ6 103 aaKnown RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 AGMATQ9BSE5 352 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 SFXN3Q9BWM7 321 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 POLR2J2Q9GZM3 115 aaKnown RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 TMEM222Q9H0R3 208 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 ISG20L2Q9H9L3 353 aaKnown RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 RETNQ9HD89 108 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 SDR39U1Q9NRG7 319 aaPredicted RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 HRASLS2Q9NWW9 162 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 RCL1Q9Y2P8 373 aaKnown RBP2.36□□□□□ -2.03
CD55-207ENST00000465534 WASHC3Q9Y3C0 194 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 OR2W1Q9Y3N9 320 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 PLXNA2O75051 1894 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 KMT2AQ03164 3969 aa2.36□□□□□ -2.03
CD55-207ENST00000465534 TRIP11Q15643 1979 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 MDC1Q14676 2089 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 MUC21A0A0G2JKD1 596 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 MUC21A0A140T8X8 626 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 A0A1W2PPM0 123 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TSPAN11A1L157 253 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 DPRXA6NFQ7 191 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 C15orf61A6NNL5 157 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 A8MU10 97 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 GGTLC3B5MD39 225 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 FAM90A26D6RGX4 464 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 C17orf112F2Z3M2 114 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 PLPP1O14494 284 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 ZNF253O75346 499 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 KRTAP5-8O75690 187 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 KLF7O75840 302 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 ATP5LO75964 103 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 IGHV4-39P01824 125 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 HLA-DPB1P04440 258 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 IL3P08700 152 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 MRPL3P09001 348 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 LGALS1P09382 135 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 VPREB1P12018 145 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 CPMP14384 443 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 BCL3P20749 454 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 CDAP32320 146 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 APOBEC1P41238 236 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 VDAC2P45880 294 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 SSR4P51571 173 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 RPS14P62263 151 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 SLC38A11Q08AI6 406 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 GAGE2BQ13066 116 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 RNPS1Q15287 305 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 MSMO1Q15800 293 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 ZNF141Q15928 474 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 SLC25A35Q3KQZ1 300 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 GAGE2EQ4V326 116 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TECRLQ5HYJ1 363 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TTC32Q5I0X7 151 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 MUC21Q5SSG8 566 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 SLC25A30Q5SVS4 291 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 OR2T5Q6IEZ7 315 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 LEG1Q6P5S2 330 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TMEM64Q6YI46 380 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 FAM231DQ6ZW35 169 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TRPT1Q86TN4 253 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 ZNF695Q8IW36 515 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 PRR22Q8IZ63 422 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 TMEM256Q8N2U0 113 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 OR4K17Q8NGC6 315 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 OR2T29Q8NH02 315 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 CMTM2Q8TAZ6 248 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 ZNF502Q8TBZ5 544 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 LMX1AQ8TE12 382 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 RTN4IP1Q8WWV3 396 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 ARPC1AQ92747 370 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 BORCS7Q96B45 105 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 SLC25A38Q96DW6 304 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 NEURL3Q96EH8 262 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 GNPNAT1Q96EK6 184 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 MRPL53Q96EL3 112 aaKnown RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 ADAT3Q96EY9 351 aaPredicted RBP2.35□□□□□ -2.03
CD55-207ENST00000465534 TIMD4Q96H15 378 aa2.35□□□□□ -2.03
CD55-207ENST00000465534 AP1S3Q96PC3 154 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms