RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 CCL20P78556 96 aa16.72■□□□□ 0.27
ITGA4-204ENST00000465522 SLC7A5P1Q8MH63 180 aa16.72■□□□□ 0.27
ITGA4-204ENST00000465522 MED9Q9NWA0 146 aa16.72■□□□□ 0.27
ITGA4-204ENST00000465522 TECRQ9NZ01 308 aaKnown RBP16.72■□□□□ 0.27
ITGA4-204ENST00000465522 TAS2R45P59539 299 aa16.71■□□□□ 0.27
ITGA4-204ENST00000465522 S100A7AQ86SG5 101 aa16.71■□□□□ 0.27
ITGA4-204ENST00000465522 MARC2Q969Z3 335 aa16.71■□□□□ 0.27
ITGA4-204ENST00000465522 ZNF414Q96IQ9 312 aa16.71■□□□□ 0.27
ITGA4-204ENST00000465522 IGHV3OR16-8A0A075B7F1 116 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 C8orf88P0DMB2 117 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 PROK1P58294 105 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 MORN5Q5VZ52 161 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 C11orf44Q8N8P7 122 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 SLC25A39Q9BZJ4 359 aaPredicted RBP16.7■□□□□ 0.26
ITGA4-204ENST00000465522 TRAV5A0A0B4J249 113 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 NDUFA4O00483 81 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 CXorf1O96002 111 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 ARL14EPLP0DKL9 152 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 CD28P10747 220 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 IL34Q6ZMJ4 242 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 COMMD7Q86VX2 200 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 IQCF2Q8IXL9 164 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 ZFAND3Q9H8U3 227 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 RABAC1Q9UI14 185 aa16.7■□□□□ 0.26
ITGA4-204ENST00000465522 NUDT19A8MXV4 375 aa16.69■□□□□ 0.26
ITGA4-204ENST00000465522 I3L521 148 aa16.69■□□□□ 0.26
ITGA4-204ENST00000465522 KHDC3LQ587J8 217 aa16.69■□□□□ 0.26
ITGA4-204ENST00000465522 TMPRSS5Q9H3S3 457 aa16.69■□□□□ 0.26
ITGA4-204ENST00000465522 A0A1B0GUS0 222 aa16.68■□□□□ 0.26
ITGA4-204ENST00000465522 C18orf65Q6ZTR6 163 aa16.68■□□□□ 0.26
ITGA4-204ENST00000465522 C4orf3Q8WVX3 66 aa16.68■□□□□ 0.26
ITGA4-204ENST00000465522 WFDC12Q8WWY7 111 aa16.68■□□□□ 0.26
ITGA4-204ENST00000465522 C20orf24Q9BUV8 137 aa16.68■□□□□ 0.26
ITGA4-204ENST00000465522 OR7C2O60412 319 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 HSPB1P04792 205 aaKnown RBP16.67■□□□□ 0.26
ITGA4-204ENST00000465522 S100A7P31151 101 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 RPEL1Q2QD12 228 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 FAM106AQ4KMX7 169 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 LEMD1Q68G75 181 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 PQLC2Q6ZP29 291 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 FAM167A-AS1Q96KT0 104 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 SHANK2-AS3Q9BTD1 123 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 SLC25A2Q9BXI2 301 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 HIST2H2BDQ6DRA6 164 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 KLHL30-AS1Q8NEE0 82 aa16.67■□□□□ 0.26
ITGA4-204ENST00000465522 IGHV4OR15-8A0A075B7B6 117 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 A0A087WW49 117 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 ZNF320A2RRD8 509 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 H3BRN7 92 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 GPHB5Q86YW7 130 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 CITED2Q99967 270 aaPredicted RBP16.66■□□□□ 0.26
ITGA4-204ENST00000465522 SCRT1Q9BWW7 348 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 GNG13Q9P2W3 67 aa16.66■□□□□ 0.26
ITGA4-204ENST00000465522 TSSC4Q9Y5U2 329 aaPredicted RBP16.66■□□□□ 0.26
ITGA4-204ENST00000465522 RAB19A4D1S5 217 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 ZNF98A6NK75 572 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 PSMB3P49720 205 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 UNQ9165/PRO28630Q6UXU0 137 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.65■□□□□ 0.26
ITGA4-204ENST00000465522 FAM210AQ96ND0 272 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 METTL26Q96S19 204 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 ZNF207O43670 478 aaKnown RBP16.65■□□□□ 0.26
ITGA4-204ENST00000465522 NPPCP23582 126 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 GCHFRP30047 84 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 FOXL1Q12952 345 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 STXBP6Q8NFX7 210 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 ZNF503Q96F45 646 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 PAXXQ9BUH6 204 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 EIF5A2Q9GZV4 153 aaKnown RBP16.65■□□□□ 0.26
ITGA4-204ENST00000465522 OR51M1Q9H341 326 aa16.65■□□□□ 0.26
ITGA4-204ENST00000465522 DEFB136Q30KP8 78 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 OR11H1Q8NG94 326 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 DPF1Q92782 380 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 CITED4Q96RK1 184 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 RNF24Q9Y225 148 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 ATRQ13535 2644 aa16.64■□□□□ 0.25
ITGA4-204ENST00000465522 A0A1W2PRX2 142 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 OR10J4P0C629 311 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 PMS2P11Q13670 270 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 GUK1Q16774 197 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 HAGHQ16775 308 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 TMEM190Q8WZ59 177 aa16.63■□□□□ 0.25
ITGA4-204ENST00000465522 RBFOX3A6NFN3 312 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 LINC01619G3V211 115 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 IFNA1P01562 189 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 PYYP10082 97 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 ZP3P21754 424 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 CRYBB3P26998 211 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 PPT1P50897 306 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 TOR2AQ5JU69 321 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 OR1N2Q8NGR9 330 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 TMEM167BQ9NRX6 74 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 HOXD3P31249 432 aaPredicted RBP16.62■□□□□ 0.25
ITGA4-204ENST00000465522 C8orf86Q6ZUL3 223 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 BPIFA4PQ86YQ2 179 aa16.62■□□□□ 0.25
ITGA4-204ENST00000465522 EIF4E3Q8N5X7 224 aaKnown RBP16.62■□□□□ 0.25
ITGA4-204ENST00000465522 UBE2L3P68036 154 aaKnown RBP16.61■□□□□ 0.25
ITGA4-204ENST00000465522 NARS2Q96I59 477 aaKnown RBP16.61■□□□□ 0.25
ITGA4-204ENST00000465522 RARRES2Q99969 163 aa16.61■□□□□ 0.25
ITGA4-204ENST00000465522 MANBALQ9NQG1 85 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms