RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 H2BFWTQ7Z2G1 175 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 SEC22AQ96IW7 307 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 C17orf77Q96MU5 243 aa10.43□□□□□ -0.74
HDAC6-214ENST00000465269 LOC102723971A0A1B0GUV8 181 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 NPPCP23582 126 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 OXA1LQ15070 435 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 ZNF600Q6ZNG1 722 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 RNASE11Q8TAA1 199 aaKnown RBP10.42□□□□□ -0.74
HDAC6-214ENST00000465269 UHRF2Q96PU4 802 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 TXN2Q99757 166 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 SEC22CQ9BRL7 303 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM231Q9H6L2 316 aa10.42□□□□□ -0.74
HDAC6-214ENST00000465269 SMIM9A6NGZ8 99 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 IGKV1-5P01602 117 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 BTF3P20290 206 aaKnown RBP10.41□□□□□ -0.74
HDAC6-214ENST00000465269 AKR1C2P52895 323 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 UBE2MP61081 183 aaKnown RBP10.41□□□□□ -0.74
HDAC6-214ENST00000465269 NUTF2P61970 127 aaKnown RBP10.41□□□□□ -0.74
HDAC6-214ENST00000465269 SSX7Q7RTT5 188 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 LYZL2Q7Z4W2 148 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 LGI3Q8N145 548 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 RBPMSQ93062 196 aaKnown RBP10.41□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM56Q96MV1 263 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 Q9H8V8 135 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 MRPL36Q9P0J6 103 aaKnown RBP10.41□□□□□ -0.74
HDAC6-214ENST00000465269 TMEM56-RWDD3S4R434 201 aa10.41□□□□□ -0.74
HDAC6-214ENST00000465269 A0A0G2JRQ6 117 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 INMT-MINDY4F8WBC2 141 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 SNAPC5O75971 98 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 ATG12O94817 140 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 CCL18P55774 89 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 SPINK9Q5DT21 86 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 SLC35G3Q8N808 338 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 GPR146Q96CH1 333 aa10.4□□□□□ -0.74
HDAC6-214ENST00000465269 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
HDAC6-214ENST00000465269 RNF213Q63HN8 5207 aa10.4□□□□□ -0.75
HDAC6-214ENST00000465269 TEX48A0A1B0GUV7 120 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 FAM90A26D6RGX4 464 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 TMEM50AO95807 157 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 FGF2P09038 288 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 HOXB5P09067 269 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 CRYBB3P26998 211 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 SRPXP78539 464 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 OR4A16Q8NH70 328 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 IL22RA2Q969J5 263 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF503Q96F45 646 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 METTL26Q96S19 204 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 MARVELD1Q9BSK0 173 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 SLC35B3Q9H1N7 401 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
HDAC6-214ENST00000465269 A0A0B4J293 547 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 A0A1W2PS18 150 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 F5H768 121 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 PTTG1O95997 202 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 IL5P05113 134 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 DEFB130BP0DP73 79 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 DEFB130AP0DP74 79 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 FCN2Q15485 313 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 RGS21Q2M5E4 152 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 Q6ZSN1 163 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF709Q8N972 641 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 COQ8AQ8NI60 647 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF431Q8TF32 576 aaPredicted RBP10.38□□□□□ -0.75
HDAC6-214ENST00000465269 RNF141Q8WVD5 230 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 ZNF586Q9NXT0 402 aa10.38□□□□□ -0.75
HDAC6-214ENST00000465269 A0A0B4J2A0 478 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 ADAP1O75689 374 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 P0C879 139 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 MLANAQ16655 118 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 CADM3Q8N126 398 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 LRTM2Q8N967 370 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 CACNG5Q9UF02 275 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 SHPKQ9UHJ6 478 aa10.37□□□□□ -0.75
HDAC6-214ENST00000465269 NXPH3O95157 252 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 HBE1P02100 147 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 NPBWR1P48145 328 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 CLINT1Q14677 625 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 GGNBP1Q5YKI7 109 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 FAM219AQ8IW50 185 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 C12orf45Q8N5I9 185 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-214ENST00000465269 MITD1Q8WV92 249 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 GLMPQ8WWB7 406 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 Q9H3A6 140 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 GPN1Q9HCN4 374 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-214ENST00000465269 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.36□□□□□ -0.75
HDAC6-214ENST00000465269 FKBP11Q9NYL4 201 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 PRNDQ9UKY0 176 aa10.36□□□□□ -0.75
HDAC6-214ENST00000465269 FAM229AH3BQW9 127 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 LINC00315P59091 139 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 SNRPD3P62318 126 aaKnown RBP10.35□□□□□ -0.75
HDAC6-214ENST00000465269 ICAM4Q14773 271 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 RRN3P1Q2M238 152 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 TIGITQ495A1 244 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 NMSQ5H8A3 153 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 Q6ZRN7 208 aaPredicted RBP10.35□□□□□ -0.75
HDAC6-214ENST00000465269 OR4B1Q8NGF8 309 aa10.35□□□□□ -0.75
HDAC6-214ENST00000465269 PGPEP1Q9NXJ5 209 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms