RNA–Protein interactions for RNA: ENST00000465229.5

EXOSC3-203, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 1,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-203ENST00000465229 C11orf94C9JXX5 98 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 H3BUA1 57 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 CLN5O75503 358 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 ELANEP08246 267 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 AKR1C3P42330 323 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 RAB9AP51151 201 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 FOXE3Q13461 319 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 RNF212Q495C1 297 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 GATAD1Q8WUU5 269 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 ACY3Q96HD9 319 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 TMEM242Q9NWH2 141 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 NAT8Q9UHE5 227 aa13.15□□□□□ -0.3
EXOSC3-203ENST00000465229 TCRBV4S1A1TA0A5B7 111 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 F6UZH7 168 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 OR2J3O76001 311 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 TRGV3P03979 118 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 HIST1H1BP16401 226 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 GCHFRP30047 84 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 RHOGP84095 191 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 TCTEX1D4Q5JR98 221 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 RNF152Q8N8N0 203 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 SMIM7Q9BQ49 75 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 MRPL32Q9BYC8 188 aaKnown RBP13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 PRELID1Q9Y255 219 aa13.14□□□□□ -0.31
EXOSC3-203ENST00000465229 NDUFB8O95169 186 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 TAS2R45P59539 299 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 KIAA0141Q14154 515 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 TMEM241Q24JQ0 296 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 FAM78BQ5VT40 261 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 TMEM116Q8NCL8 245 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 NPIPB3Q92617 1050 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 HIST1H2BAQ96A08 127 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 MISP3Q96FF7 219 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 IGKV1D-37A0A075B6S9 117 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 OR2C1O95371 312 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 RPLP1P05386 114 aaKnown RBP13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 FLI1Q01543 452 aaPredicted RBP13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 SPATA31B1PQ5VZV4 182 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 NECAP1Q8NC96 275 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 OR1L4Q8NGR5 311 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 YPEL4Q96NS1 127 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 PFDN5Q99471 154 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 PARLQ9H300 379 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 FBXL7Q9UJT9 491 aa13.13□□□□□ -0.31
EXOSC3-203ENST00000465229 I3L2K1 104 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 K7EIM0 57 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 TPPP2P59282 170 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 KRTAP10-3P60369 221 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 OR4X2Q8NGF9 303 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 MYOZ3Q8TDC0 251 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 TMEM158Q8WZ71 300 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 TRGV9Q99603 122 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 CTDSP1Q9GZU7 261 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 DNAJC4Q9NNZ3 241 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 THYN1Q9P016 225 aa13.12□□□□□ -0.31
EXOSC3-203ENST00000465229 STAB1Q9NY15 2570 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 IGHV3-21A0A0B4J1V1 117 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 CD28P10747 220 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 RND2P52198 227 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 CST9LP1Q5W188 147 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 HIST2H2BDQ6DRA6 164 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 MIR17HGQ75NE6 70 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 C11orf44Q8N8P7 122 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 DOK5Q9P104 306 aa13.11□□□□□ -0.31
EXOSC3-203ENST00000465229 FAM223BA6NKX1 122 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 FAM223AQ8IWN6 122 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 ZNF491Q8N8L2 437 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 TMEM37Q8WXS4 190 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 RPUSD4Q96CM3 377 aaKnown RBP13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 USMG5Q96IX5 58 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 C8orf88P0DMB2 117 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 ATP5G2Q06055 141 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 WFDC12Q8WWY7 111 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 ISOC2Q96AB3 205 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 MLXQ9UH92 298 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 S4R3C0 116 aa13.1□□□□□ -0.31
EXOSC3-203ENST00000465229 ELOA3CA0A087WX78 387 aaPredicted RBP13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 NPPCP23582 126 aa13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 ATP5G3P48201 142 aa13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 UBE2G2P60604 165 aa13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 VN1R17PQ8TDU5 208 aa13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 CITED2Q99967 270 aaPredicted RBP13.09□□□□□ -0.31
EXOSC3-203ENST00000465229 A0A0G2JLM5 398 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 COX7A2P2O60397 106 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 RAB5AP20339 215 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 ZNF674Q2M3X9 581 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 FAM24BQ8N5W8 94 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 UBE2E2Q96LR5 201 aa13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 YTHDF2Q9Y5A9 579 aaKnown RBP13.08□□□□□ -0.32
EXOSC3-203ENST00000465229 IGHV3-11P01762 117 aa13.07□□□□□ -0.32
EXOSC3-203ENST00000465229 IGHV3-23P01764 117 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms