RNA–Protein interactions for RNA: ENST00000465158.5

RBM39-225, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 825 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-225	ENST00000465158	CXorf1	O96002	111 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	CLEC3B	P05452	202 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	CD5	P06127	495 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	LINC00869	P0C866	280 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	ZP3	P21754	424 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	CDX1	P47902	265 aa	Predicted RBP	5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	CDC34	P49427	236 aa	Predicted RBP	5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	PSMB3	P49720	205 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	MEOX2	P50222	304 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	RUNX1	Q01196	453 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	FOXL1	Q12952	345 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	KHDC3L	Q587J8	217 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	C10orf113	Q5VZT2	155 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158		Q6ZSV7	163 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	KLHDC1	Q8N7A1	406 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	FAM213B	Q8TBF2	198 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	MBD3L1	Q8WWY6	194 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	MS4A10	Q96PG2	267 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	NKX6-2	Q9C056	277 aa	Predicted RBP	5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	TMEM231	Q9H6L2	316 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	TECR	Q9NZ01	308 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	PEF1	Q9UBV8	284 aa	Known RBP	5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	ARL2-SNX15	V9GYD0	113 aa		5.2	□□□□□ -1.58
RBM39-225	ENST00000465158	IGKV1OR2-108	A0A075B7D4	117 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158		A0A1W2PS18	150 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	CLPSL1	A2RUU4	121 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	RAB19	A4D1S5	217 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	NDUFA4	O00483	81 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	CTSG	P08311	255 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	PSG1	P11464	419 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	ARL3	P36405	182 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	ELL	P55199	621 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	C1orf194	Q5T5A4	169 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	SAMD13	Q5VXD3	122 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	UQCC3	Q6UW78	93 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	ZNF491	Q8N8L2	437 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	OR5AU1	Q8NGC0	362 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	SVIP	Q8NHG7	77 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	LYPD6B	Q8NI32	183 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	SFT2D1	Q8WV19	159 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	RNF125	Q96EQ8	232 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	GRAMD2B	Q96HH9	432 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	NOL4L	Q96MY1	436 aa	Predicted RBP	5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	ELOVL1	Q9BW60	279 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	SH3BGRL3	Q9H299	93 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	ESM1	Q9NQ30	184 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	MANBAL	Q9NQG1	85 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	TMEM167B	Q9NRX6	74 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	RPRM	Q9NS64	109 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	SERTAD4	Q9NUC0	356 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	RABAC1	Q9UI14	185 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	FUT9	Q9Y231	359 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	HIGD1A	Q9Y241	93 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	DMRT1	Q9Y5R6	373 aa		5.19	□□□□□ -1.58
RBM39-225	ENST00000465158	IGKV1D-37	A0A075B6S9	117 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	WI2-2373I1.2	A0A1W2PRP0	233 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	LINC00862	A6NCI5	91 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	MFSD2B	A6NFX1	497 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	OR2T8	A6NH00	312 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	SH2D7	A6NKC9	451 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158		K7EMT4	169 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	IGKV1-17	P01599	117 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	HSPB1	P04792	205 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	NMB	P08949	121 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	LGALS1	P09382	135 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	OR5G3	P0C626	314 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	C8orf88	P0DMB2	117 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	ORM2	P19652	201 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	NPPC	P23582	126 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	GPR183	P32249	361 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	PEA15	Q15121	130 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	GUK1	Q16774	197 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	FAM78B	Q5VT40	261 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	MIC13	Q5XKP0	118 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	CLEC19A	Q6UXS0	136 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	BPIFA4P	Q86YQ2	179 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	GPHB5	Q86YW7	130 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	RPP25L	Q8N5L8	163 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	EIF4E3	Q8N5X7	224 aa	Known RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	MYOZ3	Q8TDC0	251 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	C4orf3	Q8WVX3	66 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	DPF1	Q92782	380 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	RAB24	Q969Q5	203 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	MARC2	Q969Z3	335 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	DUX5	Q96PT3	197 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	METTL26	Q96S19	204 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	TCEAL7	Q9BRU2	100 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	GNB4	Q9HAV0	340 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	CLEC5A	Q9NY25	188 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	LINC00527	Q9UJ94	153 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	UFC1	Q9Y3C8	167 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	TSSC4	Q9Y5U2	329 aa	Predicted RBP	5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	NF1	P21359	2839 aa		5.18	□□□□□ -1.58
RBM39-225	ENST00000465158	MAP1LC3B2	A6NCE7	125 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	LGALS9	O00182	355 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	YIF1A	O95070	293 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	IL4	P05112	153 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	STAG3L2	P0CL84	134 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	STAG3L3	P0CL85	134 aa		5.17	□□□□□ -1.58
RBM39-225	ENST00000465158	RPL7	P18124	248 aa	Known RBP	5.17	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms