RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 LAMTOR1Q6IAA8 161 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 KCNRGQ8N5I3 272 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 OR1L4Q8NGR5 311 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 PPP1R14BQ96C90 147 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 GNPNAT1Q96EK6 184 aaPredicted RBP13.23□□□□□ -0.29
CPSF4-209ENST00000465132 PFDN5Q99471 154 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 ARPC5LQ9BPX5 153 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 PBDC1Q9BVG4 233 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 NPCDR1Q9BY65 106 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 ZFAND3Q9H8U3 227 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 SMAD5-AS1Q9Y6J3 95 aa13.23□□□□□ -0.29
CPSF4-209ENST00000465132 STAB2Q8WWQ8 2551 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 IGHV7-4-1A0A0J9YVY3 117 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 RNF222A6NCQ9 220 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 HYPMO75409 117 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 LINC00869P0C866 280 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 FOLR2P14207 255 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 PLP1P60201 277 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 LYZP61626 148 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 UNQ9165/PRO28630Q6UXU0 137 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 MGST2Q99735 147 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 TIMM9Q9Y5J7 89 aa13.22□□□□□ -0.29
CPSF4-209ENST00000465132 CSN3P07498 182 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 C8orf88P0DMB2 117 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 CRYBB3P26998 211 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 B2MP61769 119 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 TM4SF20Q53R12 229 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 GGTLC1Q9BX51 225 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 SMPXQ9UHP9 88 aa13.21□□□□□ -0.29
CPSF4-209ENST00000465132 TRAV25A0A0B4J276 109 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 TMEM213A2RRL7 107 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 HELTA6NFD8 242 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 COX7A2P2O60397 106 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 ORM2P19652 201 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 OPCMLQ14982 345 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 C1orf194Q5T5A4 169 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 LCN12Q6JVE5 192 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 STPG3Q8N7X2 389 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 OR11H4Q8NGC9 324 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 OR1B1Q8NGR6 318 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 GPR82Q96P67 336 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 RNF2Q99496 336 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 ARL6Q9H0F7 186 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 SLC39A9Q9NUM3 307 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 HIGD1AQ9Y241 93 aa13.2□□□□□ -0.3
CPSF4-209ENST00000465132 MBP02144 154 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 OR5G3P0C626 314 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 RBPMS2Q6ZRY4 209 aaKnown RBP13.19□□□□□ -0.3
CPSF4-209ENST00000465132 SBSPONQ8IVN8 264 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 MUC7Q8TAX7 377 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 GATAD1Q8WUU5 269 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 PSMG3Q9BT73 122 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-209ENST00000465132 RHPN1-AS1Q9BWJ2 59 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 DNAJC4Q9NNZ3 241 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 PXMP4Q9Y6I8 212 aa13.19□□□□□ -0.3
CPSF4-209ENST00000465132 HUWE1Q7Z6Z7 4374 aaKnown RBP13.19□□□□□ -0.3
CPSF4-209ENST00000465132 RYR2Q92736 4967 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 BCL2L11O43521 198 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PAFAH1B2P68402 229 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 SERF2P84101 59 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PRR20EP86478 221 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PRR20CP86479 221 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PRR20DP86480 221 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PRR20BP86481 221 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 PRR20AP86496 221 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 USF2Q15853 346 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-209ENST00000465132 CASC10Q5T4H9 136 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 C10orf113Q5VZT2 155 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 EIF5AL1Q6IS14 154 aaKnown RBP13.18□□□□□ -0.3
CPSF4-209ENST00000465132 RCHY1Q96PM5 261 aa13.18□□□□□ -0.3
CPSF4-209ENST00000465132 IGHV3OR16-8A0A075B7F1 116 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 IGLV1-51P01701 117 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 IL34Q6ZMJ4 242 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 TMUB2Q71RG4 321 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 VSIRQ9H7M9 311 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 DNAH7Q8WXX0 4024 aa13.17□□□□□ -0.3
CPSF4-209ENST00000465132 CHEK1O14757 476 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
CPSF4-209ENST00000465132 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-209ENST00000465132 ACOT6Q3I5F7 207 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-209ENST00000465132 SAMD13Q5VXD3 122 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 MIC13Q5XKP0 118 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 HSD17B11Q8NBQ5 300 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-209ENST00000465132 ARV1Q9H2C2 271 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 WFDC1Q9HC57 220 aa13.16□□□□□ -0.3
CPSF4-209ENST00000465132 FRMD6-AS1P0C7T7 363 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 TPT1P13693 172 aaKnown RBP13.15□□□□□ -0.3
CPSF4-209ENST00000465132 CXCL2P19875 107 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 MEOX2P50222 304 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 DEFB114Q30KQ6 69 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 RPL7L1Q6DKI1 246 aaKnown RBP13.15□□□□□ -0.3
CPSF4-209ENST00000465132 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 OR2G3Q8NGZ4 309 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 U3KQE9 123 aa13.15□□□□□ -0.3
CPSF4-209ENST00000465132 DYNC2H1Q8NCM8 4307 aaKnown RBP13.15□□□□□ -0.3
CPSF4-209ENST00000465132 SORL1Q92673 2214 aa13.15□□□□□ -0.31
CPSF4-209ENST00000465132 BUB3O43684 328 aa13.14□□□□□ -0.31
CPSF4-209ENST00000465132 RPL7P18124 248 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms