RNA–Protein interactions for RNA: ENST00000464938.1

NUCKS1-202, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

TSL 2

Gene NUCKS1, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-202ENST00000464938 KRTAP19-3Q7Z4W3 81 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 PDZD9Q8IXQ8 264 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 Q8N6K4 173 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 YPEL2Q96QA6 119 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 AMELYQ99218 206 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 IMUPQ9GZP8 106 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 ARL2BPQ9Y2Y0 163 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 EML6Q6ZMW3 1958 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 TNRC6AQ8NDV7 1962 aaKnown RBP0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 NISCHQ9Y2I1 1504 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 LAMA4Q16363 1823 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 CNTRLQ7Z7A1 2325 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 OBSL1O75147 1896 aa0.31□□□□□ -2.36
NUCKS1-202ENST00000464938 MIA2Q96PC5 1412 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 SCN10AQ9Y5Y9 1956 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 CECR2Q9BXF3 1484 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 A0A087WSZ3 146 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 TAX1BP3O14907 124 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 CCL25O15444 150 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 NDUFB3O43676 98 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 NUPR1O60356 82 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 SERPINA1P01009 418 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 IFNA7P01567 189 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 IGLV1-51P01701 117 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 ZNF25P17030 456 aaPredicted RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 SRP14P37108 136 aaKnown RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 DSCR4P56555 118 aaPredicted RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 ARF6P62330 175 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 RHOBP62745 196 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 UBE2BP63146 152 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 TEX261Q6UWH6 196 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 PATE2Q6UY27 113 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 GRINAQ7Z429 371 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 CLECL1Q8IZS7 167 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 OR10K1Q8NGX5 313 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 CANT1Q8WVQ1 401 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 CHMP6Q96FZ7 201 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 TEX37Q96LM6 180 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 GPER1Q99527 375 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 C6orf62Q9GZU0 229 aaPredicted RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 ACER3Q9NUN7 267 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 OPTCQ9UBM4 332 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 FAM32AQ9Y421 112 aaKnown RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 U3KQ87 197 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 MYH7BA7E2Y1 1941 aa0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 EIF3AQ14152 1382 aaKnown RBP0.3□□□□□ -2.36
NUCKS1-202ENST00000464938 NCAPD3P42695 1498 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 PLXNA4Q9HCM2 1894 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 FRMPD1Q5SYB0 1578 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 KIAA1549Q9HCM3 1950 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 PHRF1Q9P1Y6 1649 aaKnown RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 IGHV1-58A0A0C4DH39 117 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 TCRBV4S1A1TA0A5B7 111 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 E7EUB6 86 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 TMEM256-PLSCR3K7ERE1 68 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 GGCTO75223 188 aaKnown RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 PRB4P10163 310 aaPredicted RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 PSG9Q00887 426 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 BCL2L15Q5TBC7 163 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 LINC00322Q6ZN03 302 aaPredicted RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 EXOC3-AS1Q8N2X6 119 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 PXT1Q8NFP0 134 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 TMEM254Q8TBM7 123 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 DGCR14Q96DF8 476 aaKnown RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 LINC00052Q96N35 136 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 SLC25A21Q9BQT8 299 aaPredicted RBP0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 TMEM70Q9BUB7 260 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 C9orf16Q9BUW7 83 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 ENY2Q9NPA8 101 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 ARL5AQ9Y689 179 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 CEP164Q9UPV0 1460 aa0.29□□□□□ -2.36
NUCKS1-202ENST00000464938 UBR2Q8IWV8 1755 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 TRAV10A0A0B4J240 114 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 TLCD2A6NGC4 264 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 HMGB3O15347 200 aaKnown RBP0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 DYNLT3P51808 116 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 MRPS15P82914 257 aaKnown RBP0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 TMED2Q15363 201 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 TAF1AQ15573 450 aaPredicted RBP0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 C4orf22Q6V702 233 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 S100A7AQ86SG5 101 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 ST6GALNAC3Q8NDV1 305 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 PLPP5Q8NEB5 264 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 PPTC7Q8NI37 304 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 BORCS5Q969J3 196 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 LYSMD1Q96S90 227 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 CCDC94Q9BW85 323 aaPredicted RBP0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 ORMDL1Q9P0S3 153 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 PCTPQ9UKL6 214 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 PRNDQ9UKY0 176 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 PYCARDQ9ULZ3 195 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 ALPK3Q96L96 1907 aa0.28□□□□□ -2.36
NUCKS1-202ENST00000464938 CD109Q6YHK3 1445 aa0.28□□□□□ -2.37
NUCKS1-202ENST00000464938 NUP98P52948 1817 aa0.27□□□□□ -2.37
NUCKS1-202ENST00000464938 CRHP06850 196 aa0.27□□□□□ -2.37
NUCKS1-202ENST00000464938 HLA-EP13747 358 aa0.27□□□□□ -2.37
NUCKS1-202ENST00000464938 INSL3P51460 131 aa0.27□□□□□ -2.37
NUCKS1-202ENST00000464938 EFNA4P52798 201 aa0.27□□□□□ -2.37
NUCKS1-202ENST00000464938 NCALDP61601 193 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms