RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 AIPO00170 330 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 OR1I1O60431 355 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 HMGN1P05114 100 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 PHBP35232 272 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 PLCXD2Q0VAA5 305 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 EXOC3-AS1Q8N2X6 119 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 STX19Q8N4C7 294 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 SLC25A40Q8TBP6 338 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 DYDC1Q8WWB3 177 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 BATF3Q9NR55 127 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 MED29Q9NX70 200 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 OR52A1Q9UKL2 312 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 EPDR1Q9UM22 224 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 UTP11Q9Y3A2 253 aaKnown RBP1.2□□□□□ -2.22
CLK1-208ENST00000464454 MED1Q15648 1581 aaPredicted RBP1.2□□□□□ -2.22
CLK1-208ENST00000464454 SBF1O95248 1867 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 DOCK3Q8IZD9 2030 aa1.2□□□□□ -2.22
CLK1-208ENST00000464454 POLEQ07864 2286 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 TENM1Q9UKZ4 2725 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 A0A087WX48 190 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 IGKV2D-26A0A0A0MRZ7 120 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 C7orf71A4D174 169 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 MAP1LC3B2A6NCE7 125 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 H7C1C5 153 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 MGST1P10620 155 aaKnown RBP1.19□□□□□ -2.22
CLK1-208ENST00000464454 SSR2P43308 183 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 ATP5G3P48201 142 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 NCALDP61601 193 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 LCN6P62502 163 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 GNG5P63218 68 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 RHOGP84095 191 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 TMEM128Q5BJH2 165 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 FMN1Q68DA7 1419 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 LCA10Q71F78 164 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 OR13D1Q8NGV5 346 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 SLAMF6Q96DU3 332 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 MALSU1Q96EH3 234 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 RTL8AQ9BWD3 113 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 IMUPQ9GZP8 106 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 MAP1LC3BQ9GZQ8 125 aa1.19□□□□□ -2.22
CLK1-208ENST00000464454 C6orf62Q9GZU0 229 aaPredicted RBP1.19□□□□□ -2.22
CLK1-208ENST00000464454 C1orf196B1AJZ1 125 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 TSTD3H0UI37 97 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 GEMIN2O14893 280 aaKnown RBP1.18□□□□□ -2.22
CLK1-208ENST00000464454 CYB5BO43169 146 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 PROSCO94903 275 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 UBL3O95164 117 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 NDUFC2O95298 119 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 CSN2P05814 226 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 GLRXP35754 106 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 PDE6HQ13956 83 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 SCGB2B2Q4G0G5 96 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 DCUN1D2Q6PH85 259 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 OR8D4Q8NGM9 314 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 HIST1H2BLQ99880 126 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 TMEM70Q9BUB7 260 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 SS18L2Q9UHA2 77 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 JPT1Q9UK76 154 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 HS3ST2Q9Y278 367 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 HSPB11Q9Y547 144 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 NUBP2Q9Y5Y2 271 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 DENND4CQ5VZ89 1909 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 DLG5Q8TDM6 1919 aa1.18□□□□□ -2.22
CLK1-208ENST00000464454 EXPH5Q8NEV8 1989 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 CACNA1BQ00975 2339 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 MIA2Q96PC5 1412 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 A0A1B0GX51 115 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 M0R378 163 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 HYPMO75409 117 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 GADD45GO95257 159 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 DHFRP00374 187 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 IFNA7P01567 189 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 SRIP30626 198 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 DEFA3P59666 94 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 KRTAP10-4P60372 401 aaPredicted RBP1.17□□□□□ -2.22
CLK1-208ENST00000464454 PSG9Q00887 426 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 LTC4SQ16873 150 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 RRN3P1Q2M238 152 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 RNASE10Q5GAN6 216 aaKnown RBP1.17□□□□□ -2.22
CLK1-208ENST00000464454 LYRM7Q5U5X0 104 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 PHF5AQ7RTV0 110 aaKnown RBP1.17□□□□□ -2.22
CLK1-208ENST00000464454 ST6GALNAC3Q8NDV1 305 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 OR9Q1Q8NGQ5 310 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 WFDC5Q8TCV5 224 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 THEM6Q8WUY1 208 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 SKA2Q8WVK7 121 aaPredicted RBP1.17□□□□□ -2.22
CLK1-208ENST00000464454 ADAT3Q96EY9 351 aaPredicted RBP1.17□□□□□ -2.22
CLK1-208ENST00000464454 TEX37Q96LM6 180 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 CARD19Q96LW7 228 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 GPER1Q99527 375 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 SPANXCQ9NY87 97 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 LAMTOR3Q9UHA4 124 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 SSR3Q9UNL2 185 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 TECTAO75443 2155 aa1.17□□□□□ -2.22
CLK1-208ENST00000464454 NCOA3Q9Y6Q9 1424 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 IGKV1-9A0A0C4DH69 117 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 DUXBA0A1W2PPF3 345 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 E7EQ34 232 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 G3V2T6 193 aa1.16□□□□□ -2.22
CLK1-208ENST00000464454 HMGB3O15347 200 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms