RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 TIMD4Q96H15 378 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 LINC00477Q96M19 166 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 LINC01587Q99440 93 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 PRADC1Q9BSG0 188 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 OR2H1Q9GZK4 316 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 OSTCQ9NRP0 149 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 UNC80Q8N2C7 3258 aa2.92□□□□□ -1.94
COL8A1-205ENST00000463753 E9PLN8 166 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 J3QLI3 93 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 MYF5P13349 255 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TNFRSF4P43489 277 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 MEOX1P50221 254 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 FOXG1P55316 489 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 HERVK_113P63121 156 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZIC1Q15915 447 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF718Q3SXZ3 478 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 SLC25A53Q5H9E4 307 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 CFAP126Q5VTH2 177 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 Q6ZPA2 131 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 CEND1Q8N111 149 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 OR13A1Q8NGR1 328 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 OR1L4Q8NGR5 311 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ATP6V0E2Q8NHE4 81 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 KIR2DL5BQ8NHK3 375 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 PRSS3P2Q8NHM4 247 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 FGFBP3Q8TAT2 258 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 UBALD1Q8TB05 177 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 LINC00479Q96M42 142 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 HIST1H4GQ99525 98 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 PLEKHA3Q9HB20 300 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 EPDR1Q9UM22 224 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 SIGLEC9Q9Y336 463 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 FAM236AA0A1B0GUQ0 79 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 FAM236BA0A1B0GV22 79 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 A0A1W2PQF6 199 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF503-AS2A6NEH8 195 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 OTOL1A6NHN0 477 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZG16O60844 167 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TUSC2O75896 110 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 DHRS3O75911 302 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 NKX2-2O95096 273 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1-5P01602 117 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IGHG1P01857 330 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 RRN3P1Q2M238 152 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 C3orf36Q3SXR2 165 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TEN1Q86WV5 123 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 CIARTQ8N365 385 aaPredicted RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ANKRD29Q8N6D5 301 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 OR10J6PQ8NGY7 276 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 OVCA2Q8WZ82 227 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 SNRNP40Q96DI7 357 aaKnown RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 PGLYRP4Q96LB8 373 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF747Q9BV97 191 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 AP5S1Q9NUS5 200 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 GCN1Q92616 2671 aaKnown RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV2D-26A0A0A0MRZ7 120 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1-39P01597 117 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IGKV1D-39P04432 117 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IL4P05112 153 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 THBDP07204 575 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 HBBP68871 147 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM155Q4W5P6 130 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 SLC25A47Q6Q0C1 308 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM14EPQ6UXP3 125 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 C15orf53Q8NAA6 179 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 RPEQ96AT9 228 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 FLYWCH2Q96CP2 140 aaKnown RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 ZNF414Q96IQ9 312 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 HEATR1Q9H583 2144 aaKnown RBP2.91□□□□□ -1.94
COL8A1-205ENST00000463753 IDI2-AS1Q9NZ38 188 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 LOXL2Q9Y4K0 774 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 CACNA1IQ9P0X4 2223 aa2.91□□□□□ -1.94
COL8A1-205ENST00000463753 TRBV25-1A0A075B6N4 114 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 A0A1W2PPI3 338 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 FAM90A18PA6NE21 464 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 FAM90A16PA6NEW6 464 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 FAM90A8PA6NJQ4 464 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 FAM90A9PA6NNJ1 464 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 A8MWV9 139 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 MGST3O14880 152 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 DNPH1O43598 174 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 ZIC3O60481 467 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 OR2J3O76001 311 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 PRB1P04280 392 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 AREGP15514 252 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 RPL35AP18077 110 aaKnown RBP2.9□□□□□ -1.94
COL8A1-205ENST00000463753 TBC1D28Q2M2D7 210 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 CRIP3Q6Q6R5 217 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 ZFP2Q6ZN57 461 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 GTSCR1Q86UQ5 136 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 GATD1Q8NB37 220 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 GJC3Q8NFK1 279 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 NABP2Q9BQ15 211 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 TXNDC17Q9BRA2 123 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM133Q9H2Q1 129 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 PRTFDC1Q9NRG1 225 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 TMEM160Q9NX00 188 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 DKK2Q9UBU2 259 aa2.9□□□□□ -1.94
COL8A1-205ENST00000463753 TCF19Q9Y242 345 aa2.9□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms