RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 SPP1P10451 314 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 TMEM41BQ5BJD5 291 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 MORN3Q6PF18 240 aaPredicted RBP11.9□□□□□ -0.5
COL1A1-202ENST00000463440 OR8I2Q8N0Y5 310 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 RARRES2Q99969 163 aa11.9□□□□□ -0.5
COL1A1-202ENST00000463440 FNDC10F2Z333 226 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 L7N2F9 121 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 IL5P05113 134 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 ORM2P19652 201 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 ID1P41134 155 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 RRAS2P62070 204 aaPredicted RBP11.89□□□□□ -0.51
COL1A1-202ENST00000463440 VAMP2P63027 116 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 CYP2G1PQ6ZSU1 146 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 OR11H2Q8NH07 326 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 ENKURQ8TC29 256 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 C2orf50Q96LR7 162 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 TMEM147Q9BVK8 224 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 BATF3Q9NR55 127 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 MGAT4CQ9UBM8 478 aa11.89□□□□□ -0.51
COL1A1-202ENST00000463440 C7orf66A4D0T2 115 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 CCNKO75909 580 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 ATF4P18848 351 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-202ENST00000463440 GATA2P23769 480 aaPredicted RBP11.88□□□□□ -0.51
COL1A1-202ENST00000463440 SELENOTP62341 195 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 OR1B1Q8NGR6 318 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 NPVFQ9HCQ7 196 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 LSM5Q9Y4Y9 91 aaKnown RBP11.88□□□□□ -0.51
COL1A1-202ENST00000463440 AGRNO00468 2067 aa11.88□□□□□ -0.51
COL1A1-202ENST00000463440 LCE6AA0A183 80 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 GALR1P47211 349 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 PSMB3P49720 205 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 SAMD13Q5VXD3 122 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 TMEM182Q6ZP80 229 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-202ENST00000463440 SLC25A22Q9H936 323 aa11.87□□□□□ -0.51
COL1A1-202ENST00000463440 GPN1Q9HCN4 374 aaPredicted RBP11.87□□□□□ -0.51
COL1A1-202ENST00000463440 CXorf65A6NEN9 183 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 K7EPK0 472 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
COL1A1-202ENST00000463440 MEOX2P50222 304 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 BCAP31P51572 246 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 RAP2BP61225 183 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 NUTF2P61970 127 aaKnown RBP11.86□□□□□ -0.51
COL1A1-202ENST00000463440 TEPPQ6URK8 271 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 S100A7AQ86SG5 101 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 LINC00052Q96N35 136 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 GPR82Q96P67 336 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 GGACTQ9BVM4 153 aa11.86□□□□□ -0.51
COL1A1-202ENST00000463440 ISLRO14498 428 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 HYPMO75409 117 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 DEDDO75618 318 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 GIG44P09565 113 aaPredicted RBP11.85□□□□□ -0.51
COL1A1-202ENST00000463440 LINC00869P0C866 280 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 CAV2P51636 162 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 EWSR1Q01844 656 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL1A1-202ENST00000463440 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 SLC25A32Q9H2D1 315 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 C11orf68Q9H3H3 251 aaKnown RBP11.85□□□□□ -0.51
COL1A1-202ENST00000463440 DOK5Q9P104 306 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 HIGD1AQ9Y241 93 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 STARD9Q9P2P6 4700 aa11.85□□□□□ -0.51
COL1A1-202ENST00000463440 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 H3BMM0 161 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 SOCS3O14543 225 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 JTBO76095 146 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 HLA-DRB4P13762 266 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 C4BPBP20851 252 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 PLP1P60201 277 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 S100A10P60903 97 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 IFITM3Q01628 133 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 ARL16Q0P5N6 197 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 RSG1Q9BU20 258 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 C1QTNF4Q9BXJ3 329 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 SLC25A39Q9BZJ4 359 aaPredicted RBP11.84□□□□□ -0.51
COL1A1-202ENST00000463440 HLA-DRB4X5D2U9 266 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 CSMD3Q7Z407 3707 aa11.84□□□□□ -0.51
COL1A1-202ENST00000463440 NUPR2A6NF83 97 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 H3BRN7 92 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 GOSR2O14653 212 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 PRAF2O60831 178 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 OR5G3P0C626 314 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 DEFA1P59665 94 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 DEFA3P59666 94 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 SLC38A11Q08AI6 406 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 FOXI2Q6ZQN5 318 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 ZNF546Q86UE3 836 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 C16orf92Q96LL3 132 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 SHANK2-AS3Q9BTD1 123 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 SCRT1Q9BWW7 348 aa11.83□□□□□ -0.52
COL1A1-202ENST00000463440 RYR3Q15413 4870 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 IL15RAQ13261 267 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 RAB32Q13637 225 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 PXDC1Q5TGL8 231 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 SPATA31B1PQ5VZV4 182 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 NRARPQ7Z6K4 114 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 ARL6Q9H0F7 186 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 SAV1Q9H4B6 383 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-202ENST00000463440 C11orf1Q9H5F2 150 aa11.82□□□□□ -0.52
COL1A1-202ENST00000463440 RPRMQ9NS64 109 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms