RNA–Protein interactions for RNA: ENST00000462996.1

PTPN18-208, Transcript of protein tyrosine phosphatase, non-receptor type 18, human

TSL 4

Gene PTPN18, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN18-208	ENST00000462996	IGKV1D-37	A0A075B6S9	117 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	TRAV26-1	A0A087WT03	109 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	CEBPZOS	A8MTT3	80 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	CNN1	P51911	297 aa	Known RBP	13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	KRTAP10-1	P60331	282 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	KLF9	Q13886	244 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	FAM219A	Q8IW50	185 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	OR8I2	Q8N0Y5	310 aa		13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	GNPNAT1	Q96EK6	184 aa	Predicted RBP	13.88	□□□□□ -0.19
PTPN18-208	ENST00000462996	TRAV12-2	A0A075B6T6	113 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	LYZ	P61626	148 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	OR5I1	Q13606	314 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	NMS	Q5H8A3	153 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	SNX29P2	Q8IUI4	249 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	CROCCP3	Q8IVE0	287 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	LHFPL5	Q8TAF8	219 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	RXFP4	Q8TDU9	374 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	CACNG5	Q9UF02	275 aa		13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	MRPS16	Q9Y3D3	137 aa	Known RBP	13.87	□□□□□ -0.19
PTPN18-208	ENST00000462996	CDS2	O95674	445 aa		13.86	□□□□□ -0.19
PTPN18-208	ENST00000462996	RPS19	P39019	145 aa	Known RBP	13.86	□□□□□ -0.19
PTPN18-208	ENST00000462996	ZNF503	Q96F45	646 aa		13.86	□□□□□ -0.19
PTPN18-208	ENST00000462996	COPZ2	Q9P299	210 aa		13.86	□□□□□ -0.19
PTPN18-208	ENST00000462996		A0A0J9YY99	117 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	ZFP92	A6NM28	416 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	MEOX2	P50222	304 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	SAMD13	Q5VXD3	122 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	CDPF1	Q6NVV7	123 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	GPR141	Q7Z602	305 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	PPP1R14B	Q96C90	147 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	LINC01587	Q99440	93 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	TMEM222	Q9H0R3	208 aa		13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.85	□□□□□ -0.19
PTPN18-208	ENST00000462996	DUSP14	O95147	198 aa	Known RBP	13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	M6PR	P20645	277 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	GAMT	Q14353	236 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	MEF2D	Q14814	521 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	IGFL4	Q6B9Z1	124 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	NOXA1	Q86UR1	476 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	ARRDC1	Q8N5I2	433 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	CCDC71L	Q8N9Z2	235 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	GLYATL2	Q8WU03	294 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	RSG1	Q9BU20	258 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	SLC25A32	Q9H2D1	315 aa		13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	NOP10	Q9NPE3	64 aa	Known RBP	13.84	□□□□□ -0.19
PTPN18-208	ENST00000462996	SNRPGP15	A8MWD9	76 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996		J3QL48	77 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	ZNF701	M0R085	212 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	OR5AC1	P0C628	307 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	HTN1	P15515	57 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	HOXA5	P20719	270 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	OR2F1	Q13607	317 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	SELENOH	Q8IZQ5	122 aa	Known RBP	13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	OR13C8	Q8NGS7	320 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	C16orf74	Q96GX8	76 aa		13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	13.83	□□□□□ -0.2
PTPN18-208	ENST00000462996	B3GALNT1	O75752	331 aa		13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	TAS2R60	P59551	318 aa		13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	RNASE10	Q5GAN6	216 aa	Known RBP	13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	ZFAND1	Q8TCF1	268 aa		13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	RBPMS	Q93062	196 aa	Known RBP	13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	RAB26	Q9ULW5	256 aa		13.82	□□□□□ -0.2
PTPN18-208	ENST00000462996	TRAV8-2	A0A0B4J237	113 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	EREG	O14944	169 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	CD3D	P04234	171 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	GALR1	P47211	349 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	ERVFC1-1	P60608	527 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	ICAM4	Q14773	271 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	RNF182	Q8N6D2	247 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	VCX3B	Q9H321	246 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996		U3KQ87	197 aa		13.81	□□□□□ -0.2
PTPN18-208	ENST00000462996	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	SMIM31	A0A1B0GVY4	71 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	BOLA2-SMG1P6	H3BVE0	249 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	RNASE12	Q5GAN4	147 aa	Known RBP	13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	TMEM144	Q7Z5S9	345 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	TMEM256	Q8N2U0	113 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	OR4D10	Q8NGI6	311 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	OR10J6P	Q8NGY7	276 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	TERB2	Q8NHR7	220 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	MARCH1	Q8TCQ1	289 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	RNASE8	Q8TDE3	154 aa	Known RBP	13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	SLC25A22	Q9H936	323 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	TNFRSF18	Q9Y5U5	241 aa		13.8	□□□□□ -0.2
PTPN18-208	ENST00000462996	HMCN2	Q8NDA2	5059 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	FAM229A	H3BQW9	127 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	IFNA5	P01569	189 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	DNAH10OS	P0CZ25	163 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	GPX4	P36969	197 aa	Predicted RBP	13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	HAMP	P81172	84 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	NEDD8	Q15843	81 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	LINC00612	Q8N6U2	182 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	COMMD3	Q9UBI1	195 aa		13.79	□□□□□ -0.2
PTPN18-208	ENST00000462996	ZNF98	A6NK75	572 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996		H3BNG1	76 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	APOA1	P02647	267 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	TMEM268	Q5VZI3	342 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996	ZNF493	Q6ZR52	646 aa		13.78	□□□□□ -0.2
PTPN18-208	ENST00000462996		Q6ZSN1	163 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms