RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ACY3Q96HD9 319 aa10.42□□□□□ -0.74
APP-211ENST00000462267 C16orf92Q96LL3 132 aa10.42□□□□□ -0.74
APP-211ENST00000462267 C20orf173Q96LM9 149 aa10.42□□□□□ -0.74
APP-211ENST00000462267 LINC01587Q99440 93 aa10.42□□□□□ -0.74
APP-211ENST00000462267 NOP10Q9NPE3 64 aaKnown RBP10.42□□□□□ -0.74
APP-211ENST00000462267 TMEM144Q7Z5S9 345 aa10.41□□□□□ -0.74
APP-211ENST00000462267 LYSMD2Q8IV50 215 aa10.41□□□□□ -0.74
APP-211ENST00000462267 OR8I2Q8N0Y5 310 aa10.41□□□□□ -0.74
APP-211ENST00000462267 HEYLQ9NQ87 328 aaPredicted RBP10.41□□□□□ -0.74
APP-211ENST00000462267 ANKRD65E5RJM6 399 aa10.4□□□□□ -0.74
APP-211ENST00000462267 HOXA5P20719 270 aa10.4□□□□□ -0.74
APP-211ENST00000462267 SDC2P34741 201 aa10.4□□□□□ -0.74
APP-211ENST00000462267 AARDQ4LEZ3 155 aa10.4□□□□□ -0.74
APP-211ENST00000462267 LINC00612Q8N6U2 182 aa10.4□□□□□ -0.74
APP-211ENST00000462267 OR52E5Q8NH55 327 aa10.4□□□□□ -0.74
APP-211ENST00000462267 RRNAD1Q96FB5 475 aaKnown RBP10.4□□□□□ -0.74
APP-211ENST00000462267 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.74
APP-211ENST00000462267 TRAV12-2A0A075B6T6 113 aa10.39□□□□□ -0.75
APP-211ENST00000462267 HTN1P15515 57 aa10.39□□□□□ -0.75
APP-211ENST00000462267 HLA-DMAP28067 261 aa10.39□□□□□ -0.75
APP-211ENST00000462267 RND3P61587 244 aa10.39□□□□□ -0.75
APP-211ENST00000462267 RNASE8Q8TDE3 154 aaKnown RBP10.39□□□□□ -0.75
APP-211ENST00000462267 LRP1Q07954 4544 aaKnown RBP10.39□□□□□ -0.75
APP-211ENST00000462267 UCP1P25874 307 aa10.38□□□□□ -0.75
APP-211ENST00000462267 MXD1Q05195 221 aa10.38□□□□□ -0.75
APP-211ENST00000462267 NOXA1Q86UR1 476 aa10.38□□□□□ -0.75
APP-211ENST00000462267 TMEM263Q8WUH6 116 aaKnown RBP10.38□□□□□ -0.75
APP-211ENST00000462267 TMEM170AQ8WVE7 144 aa10.38□□□□□ -0.75
APP-211ENST00000462267 PPP1R14BQ96C90 147 aa10.38□□□□□ -0.75
APP-211ENST00000462267 S100A16Q96FQ6 103 aaKnown RBP10.38□□□□□ -0.75
APP-211ENST00000462267 TP53RKQ96S44 253 aa10.38□□□□□ -0.75
APP-211ENST00000462267 SSR3Q9UNL2 185 aa10.38□□□□□ -0.75
APP-211ENST00000462267 A0A096LPF7 62 aa10.37□□□□□ -0.75
APP-211ENST00000462267 A0A0G2JRQ6 117 aa10.37□□□□□ -0.75
APP-211ENST00000462267 BOLA2-SMG1P6H3BVE0 249 aa10.37□□□□□ -0.75
APP-211ENST00000462267 CLEC2LP0C7M8 214 aa10.37□□□□□ -0.75
APP-211ENST00000462267 ZNF182P17025 639 aaPredicted RBP10.37□□□□□ -0.75
APP-211ENST00000462267 GALR1P47211 349 aa10.37□□□□□ -0.75
APP-211ENST00000462267 KLF9Q13886 244 aaPredicted RBP10.37□□□□□ -0.75
APP-211ENST00000462267 SPARTQ8N0X7 666 aa10.37□□□□□ -0.75
APP-211ENST00000462267 RNASE11Q8TAA1 199 aaKnown RBP10.37□□□□□ -0.75
APP-211ENST00000462267 ZNF486Q96H40 463 aaPredicted RBP10.37□□□□□ -0.75
APP-211ENST00000462267 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.37□□□□□ -0.75
APP-211ENST00000462267 NXPH4O95158 308 aa10.36□□□□□ -0.75
APP-211ENST00000462267 PGAM2P15259 253 aa10.36□□□□□ -0.75
APP-211ENST00000462267 PRSS3P35030 304 aa10.36□□□□□ -0.75
APP-211ENST00000462267 LYZP61626 148 aa10.36□□□□□ -0.75
APP-211ENST00000462267 GAMTQ14353 236 aa10.36□□□□□ -0.75
APP-211ENST00000462267 TRIM16LQ309B1 348 aa10.36□□□□□ -0.75
APP-211ENST00000462267 RSG1Q9BU20 258 aa10.36□□□□□ -0.75
APP-211ENST00000462267 TRAV9-2A0A087WT02 112 aa10.35□□□□□ -0.75
APP-211ENST00000462267 IGLV5-52A0A0A0MRZ9 124 aa10.35□□□□□ -0.75
APP-211ENST00000462267 C3orf85A0A1B0GTC6 90 aa10.35□□□□□ -0.75
APP-211ENST00000462267 ZNF98A6NK75 572 aa10.35□□□□□ -0.75
APP-211ENST00000462267 ZFP92A6NM28 416 aa10.35□□□□□ -0.75
APP-211ENST00000462267 SNRPGP15A8MWD9 76 aa10.35□□□□□ -0.75
APP-211ENST00000462267 TMEM127O75204 238 aa10.35□□□□□ -0.75
APP-211ENST00000462267 OXTP01178 125 aa10.35□□□□□ -0.75
APP-211ENST00000462267 FABP1P07148 127 aa10.35□□□□□ -0.75
APP-211ENST00000462267 PIGPP57054 158 aa10.35□□□□□ -0.75
APP-211ENST00000462267 ZNF90Q03938 601 aa10.35□□□□□ -0.75
APP-211ENST00000462267 FAM219AQ8IW50 185 aa10.35□□□□□ -0.75
APP-211ENST00000462267 NTN5Q8WTR8 489 aaPredicted RBP10.35□□□□□ -0.75
APP-211ENST00000462267 SLC25A39Q9BZJ4 359 aaPredicted RBP10.35□□□□□ -0.75
APP-211ENST00000462267 BLOC1S6Q9UL45 172 aa10.35□□□□□ -0.75
APP-211ENST00000462267 DNAH8Q96JB1 4490 aa10.35□□□□□ -0.75
APP-211ENST00000462267 GAGE12BA1L429 117 aa10.34□□□□□ -0.75
APP-211ENST00000462267 CEBPZOSA8MTT3 80 aa10.34□□□□□ -0.75
APP-211ENST00000462267 GAGE7O76087 117 aa10.34□□□□□ -0.75
APP-211ENST00000462267 RLN2P04090 185 aa10.34□□□□□ -0.75
APP-211ENST00000462267 GAGE12FP0CL80 117 aa10.34□□□□□ -0.75
APP-211ENST00000462267 GAGE12GP0CL81 117 aa10.34□□□□□ -0.75
APP-211ENST00000462267 GAGE12IP0CL82 117 aa10.34□□□□□ -0.75
APP-211ENST00000462267 RCVRNP35243 200 aa10.34□□□□□ -0.75
APP-211ENST00000462267 NMSQ5H8A3 153 aa10.34□□□□□ -0.75
APP-211ENST00000462267 TMED4Q7Z7H5 227 aa10.34□□□□□ -0.75
APP-211ENST00000462267 VSIG2Q96IQ7 327 aa10.34□□□□□ -0.75
APP-211ENST00000462267 IGKV1D-37A0A075B6S9 117 aa10.33□□□□□ -0.76
APP-211ENST00000462267 H7BYZ3 331 aa10.33□□□□□ -0.76
APP-211ENST00000462267 C1QBP02746 253 aa10.33□□□□□ -0.76
APP-211ENST00000462267 PI3P19957 117 aa10.33□□□□□ -0.76
APP-211ENST00000462267 SP6Q3SY56 376 aa10.33□□□□□ -0.76
APP-211ENST00000462267 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.33□□□□□ -0.76
APP-211ENST00000462267 SLC25A32Q9H2D1 315 aa10.33□□□□□ -0.76
APP-211ENST00000462267 PPP1R14DQ9NXH3 145 aa10.33□□□□□ -0.76
APP-211ENST00000462267 MSRB1Q9NZV6 116 aa10.33□□□□□ -0.76
APP-211ENST00000462267 NPIPB6E9PJ23 425 aa10.32□□□□□ -0.76
APP-211ENST00000462267 K7EP13 123 aa10.32□□□□□ -0.76
APP-211ENST00000462267 B3GALNT1O75752 331 aa10.32□□□□□ -0.76
APP-211ENST00000462267 AQP4P55087 323 aa10.32□□□□□ -0.76
APP-211ENST00000462267 RHOBP62745 196 aa10.32□□□□□ -0.76
APP-211ENST00000462267 UBE2NLQ5JXB2 153 aa10.32□□□□□ -0.76
APP-211ENST00000462267 CCDC28AQ8IWP9 274 aa10.32□□□□□ -0.76
APP-211ENST00000462267 LINC00528Q8N1L1 170 aa10.32□□□□□ -0.76
APP-211ENST00000462267 OR4D5Q8NGN0 318 aa10.32□□□□□ -0.76
APP-211ENST00000462267 GPX8Q8TED1 209 aa10.32□□□□□ -0.76
APP-211ENST00000462267 FAM30AQ9NZY2 134 aa10.32□□□□□ -0.76
APP-211ENST00000462267 CACFD1Q9UGQ2 172 aa10.32□□□□□ -0.76
APP-211ENST00000462267 FAT3Q8TDW7 4589 aa10.32□□□□□ -0.76
APP-211ENST00000462267 TRAV8-2A0A0B4J237 113 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms